Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1856 ATGGAATCCAAAGAGCTATTTGGTAGCAATTACCTGCTGTTGAAGCCAGAAGAAGCAAGTGTCTTTGATCTTGGGAGCCTCTTGTTCTCTTCTAAGTTGAGCAACAGAAGATTTATAGAGTGCAGAGAAGAGATTCAGGCAACAGATTTTCGACAAAGATGGCTCATCTTCGTATCTGTTGTGACACAGATTCTCCTTCTTGCCTCAAGAAACTCCTTGAAGAAGGTTGGAGACATCTTGGAGTTTTCGGTCAATCTTTTATCATGCAATGGAGGTTTCAAAGGACTCTTTTTCAACATTCTAAGAGGAAAGGTGAAAAGACCAGAGAAATCATCTGCATCATATTCATCTGCGGTGGGCTTAGTTGACACACGAGTTGACTTAGACAAAAACATTAAACAAAATGATGCCAAATACAAAGGATTCCTCTCAATGATGGCTTCAAAGATTTCCTACGAAAATGAAAATTTTCTTTGTAACGCAGTGCAAAATCATTGGAATATGGAGTTTTTGGGGTTACACAGCTTCTGGAACGACTACCAAGAGCAGTGGTCGACACAAGCAATCATATTGCAAGATAAGAAGTGGAAACCGACGTTGATCGTTGTTGCATTCAGGGGTACAGAGGCATTTGATGCGGATAAATGGAGAACGGATGTGGATATCTCTTGGTACCACTTGCCCAATGTGGGTAGAATACATGGTGGCTTCATGAAAGCTTTGGGTCTTCAGAAGAACAGTGGATGGCCCAGAGAGATTGACCAAACCACCCACCATTCTTACGCCTACTATGCAATCAGAGAGAAGATCAGAACAATGTTGGAGGCAAATACGGATGCAAAATTCATAGTGACAGGGCACAGTTTGGGAGGAGCCTTGGCCATTCTCTTTGCTGCTCTTCTCACAATACATGAGGAGGCATGGCTGTTGGACAAGTTAGAAGGGGTTTATACATTTGGGCAGCCACGAGTTGGGGACTATGAGTTTGGGGAGTTCATGAAGGACAAGTTGAGAGAGTATGATGTGAGATACATGAGATATGTTTACTCCAATGATATAGTGCCTAGGATCCCTTACGATGACAAAAACCTCTTCTTTAAACACTTCGGTCCTTGCCTCTACTTCAACAGCTTGTACCAGGCCCAGGTTCTAGAGGAGGAGCCAAACAAGAACTATTTTTCTTTGTTCTGGGTCCTGCCCAAGATACTAAACGCAGTCTGGGAGCTTATTAGAGGATTTCTTCTCCCCCTCGTTGTAGGTGAAAGCTATACTCAGACCTGGATCATGACGATAATCAGGTTCTTTGGATTGATGATTCCAGGAATAGCTGAACATATTCCTACAGATTATGTCAATCTTACCAGGTTAGGATGTTTACCCGAACTTTTGGAACTTCAAAACTCGCAAGATTCCAAGGCTGACTGA 1425 0.4267 MESKELFGSNYLLLKPEEASVFDLGSLLFSSKLSNRRFIECREEIQATDFRQRWLIFVSVVTQILLLASRNSLKKVGDILEFSVNLLSCNGGFKGLFFNILRGKVKRPEKSSASYSSAVGLVDTRVDLDKNIKQNDAKYKGFLSMMASKISYENENFLCNAVQNHWNMEFLGLHSFWNDYQEQWSTQAIILQDKKWKPTLIVVAFRGTEAFDADKWRTDVDISWYHLPNVGRIHGGFMKALGLQKNSGWPREIDQTTHHSYAYYAIREKIRTMLEANTDAKFIVTGHSLGGALAILFAALLTIHEEAWLLDKLEGVYTFGQPRVGDYEFGEFMKDKLREYDVRYMRYVYSNDIVPRIPYDDKNLFFKHFGPCLYFNSLYQAQVLEEEPNKNYFSLFWVLPKILNAVWELIRGFLLPLVVGESYTQTWIMTIIRFFGLMIPGIAEHIPTDYVNLTRLGCLPELLELQNSQDSKAD* 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1856 474 Pfam Lipase (class 3) 202 361 IPR002921 GO:0006629
Vra6g1856 474 Gene3D alpha/beta hydrolase 130 395 IPR029058 -
Vra6g1856 474 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 4 466 IPR044819 GO:0004806|GO:0006629
Vra6g1856 474 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 4 466 - -
Vra6g1856 474 SUPERFAMILY alpha/beta-Hydrolases 143 381 IPR029058 -
Vra6g1856 474 CDD Lipase_3 143 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1856 Vra-Chr6 35185927 35190083 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1856 10 474 Acyl Lipid Metabolism Gene Families AT1G56630 50.932 2.75e-171 489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1856 6 35185927 35190083 Vra6g1856 6 35185927 35190083 ECH