Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1844 ATGGCGAGACTCGCTCACCCTCTCAGTATCTTCACACAATCCCATTACTGGCGCCCACTTCTGTGTTGCCACTACTTCAAACGTACCCTAACTGCTAGTACTAACTTCTCCTCCCTCACTACATTAGCTCGAAGGGATAAATCACAAGAGGGAGGAACAACCACAGTTAAGCTTTCAACCAAAGCGAGAAGGAAAGCTTTCTACGAATCTCCTGAAGGGGTCTTATTGCGTAAGCTAAACCAATGCTCACGTGAGGGAGATGTTGTTCAAGCCCTTTGCCACTATGATGAGGCCAGAAAATTGGGGGTTGTACTCAACCTTGATCACTATAACAAATTGTTATACTTATGTTCTATTGAAAATGCTGATGTTGCCCAAATGGGTCTCAAAAGGGGGTTCGAGATATTTCAGCAGATGTTGAATGACCGAGTTCAGCCCAATGAAGCCACCTTTACCAATGCTGCTAGGCTTGCTGCTGCCAAGGAAGATCCCGATATGGCTTTTGAATTGCTAAAGCAGATGAAGAATGTTGCTATTGTTCCCAAGCTAAGATCGTATGAACCAGCTTTGTTTGGATTTTGCAAGAGGGGTGATGCTGAGAAAGCTTATCTAGTTGATGCTGACATGATTGAGTCTGGTATTGTGGCTGAAGAGCCTGAGCTTTCTGCTCTTTTGGAAGTCAGTGTCAAAACAAAGAAGGAAGACAGGGTATATGAGATTTTGCATCGTTTGCGTGCTACTGTGAGACAGGTGTCTGAATCAACTTCACGGATAGTTCAGGACTGGTTCAACTCAGAATATGCTGCAAAAATTGGAAAGGAGAAGTGGGATGTGAATAAAGTGAGGGAAGGGATTCTTCAGGGAGGTGGAGGATGGCATGGTCAAGGGTGGCTTGGGAGTGGGCGATGGAAAATGGTGGAGACTCAGGTGAACGAGGATGGTGAGTGTCTCTCGTGTGGTGAGAAGCTTGTGAGCATTGATATTGATCCAAAAGAGACCGAAACCTTTGCTGCCTCATTATCTAAATTAGCTTGCCAAAAAGAAGCCAAGGAAAACTTTGTTCATTTTCAGTGGCTTGAGCGGCATGGCCCATTTGATGCTGTTGTAGATGGTGCAAATGTAGGCCTATCCAATGGGCATAATTTCAGCTTTTCGAGGCTTAATACTGTTGTTGAACAATTACGTCAAAAAAGCCCTTCCAAGAGATTGCCCCTTGTAATTTTGCATGCAAGCCGAGTATATGGTGGTCCTGCTCAAAATCAAAAAAACAGGAGACTCATAGAAAATTGGAAAAAAAATGGTGCTCTTTATGCTACACCTCAAGGTTCAAATGATGACTGGTACTGGTTATATGCTGCTGTTAGTTGTAAATGCTTACTGTTAACAGATGATGAGATGAGGGACCACTTGTTCCAGCTACTTGGTTCTAGTTTTTTCCCGAGATGGAAGGAAAAACATCAGGTTCGAGCATCAAGCTCACCTTCTGGAGTCTCCCTAATTATGCCTCCACGTTATTCTATAGTTATTCAGGAATCGGCCAATGGTAGCTGGCACGTGCCAACTATAACTAGTGATGATCCTGAGATCCCAAGGAAATGGTTGTGTGCCGCAAGATCCAAAAACAATTCATTGCAAAGTGTATGGACATCCTCCTCCAAGTCTGACTGA 1668 0.4394 MARLAHPLSIFTQSHYWRPLLCCHYFKRTLTASTNFSSLTTLARRDKSQEGGTTTVKLSTKARRKAFYESPEGVLLRKLNQCSREGDVVQALCHYDEARKLGVVLNLDHYNKLLYLCSIENADVAQMGLKRGFEIFQQMLNDRVQPNEATFTNAARLAAAKEDPDMAFELLKQMKNVAIVPKLRSYEPALFGFCKRGDAEKAYLVDADMIESGIVAEEPELSALLEVSVKTKKEDRVYEILHRLRATVRQVSESTSRIVQDWFNSEYAAKIGKEKWDVNKVREGILQGGGGWHGQGWLGSGRWKMVETQVNEDGECLSCGEKLVSIDIDPKETETFAASLSKLACQKEAKENFVHFQWLERHGPFDAVVDGANVGLSNGHNFSFSRLNTVVEQLRQKSPSKRLPLVILHASRVYGGPAQNQKNRRLIENWKKNGALYATPQGSNDDWYWLYAAVSCKCLLLTDDEMRDHLFQLLGSSFFPRWKEKHQVRASSSPSGVSLIMPPRYSIVIQESANGSWHVPTITSDDPEIPRKWLCAARSKNNSLQSVWTSSSKSD* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1844 555 Gene3D - 328 501 - -
Vra6g1844 555 PANTHER UNCHARACTERIZED 39 542 - -
Vra6g1844 555 Gene3D Tetratricopeptide repeat domain 71 538 IPR011990 GO:0005515
Vra6g1844 555 Pfam Protein-only RNase P 310 535 IPR031595 -
Vra6g1844 555 Pfam Pentacotripeptide-repeat region of PRORP 63 269 IPR033443 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1844 Vra-Chr6 35029386 35038009 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1844 79 240 Miscellaneous Gene Families AT4G11690 24.540 1.37e-09 58.9