Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1842 ATGGGTCAACTGATACATGTTGCAGTGGTGGCAGCCTCCTTGGGATGTGTTTCAACCCTTTTGCTGGTTTTCATGTGGCGTTGGTGTCATCACAAGAGAGACCACAGAAACTTTGTTGAAGCCAATAGCTTGACCAGAATGGAGAGTCTCCAAGCAGGAATTGCAAGACTTCATCAACAGCAACCTGCAGTATATCACCAATTTGACGAGAAGAGCAAGAACAAAAGCAAAAACAAAAACAAAGGCAACTTTTATGTTTTTCACAATGGAGTATCTAGAAGAGGGCATTTGTTCAACTGGGATGATCATCCCTATCTTGTGGTTGATGCTGTGGAAAATGGGTGGTCTGGATTTGGATTTTCCAACTACAAGAGCAACATGCCATCTCCTTCAAAAAGATCAAGTCTTTTGGGAGCATGTGCTGCTGCTGAGAATGGAAGAGAAAGTGAGGCTGAGATAAGTTGGGAAGTGTGTAATGGATCAGCTGAATATATGCAGAAGGTTAGACTCAATCCTGAGTTGAAGAAGGTTCTTCATTCAAACAACTCTTCCAATATGAGTGTTGCTTCTGTCATTAGGACTTCTCTACCTCTTCCTGGCCCTCCTTTGGGAAACTATGCCTTCCCACAAGAAGCCTATTTTGAAATCACCATACTGTGTTCTGGTGTTGGTAATCATGAATCAGTTGTTGGAAAGAAAGAAGGTGAGAAGACAAAACTCCTCATTGAAGATGGTTCCAATGGTGTATGTGATTCGGATATGGTTGAAGAAGTGAAACTTGGGCAGAAAGAGGGTGGTGGAAGGAGTGGATCTGTGATGTTCTCATTGGGGTTAACAGCAGGAGGAGGTGTTCCTTTAAGAGTTCCAGGTAGCTATCCTAGGAGCATTGGATTCAACTCCAATGGTTCTGTCTTTCTTGAAGGAATGAAACTTGTGATGGAGTCTGAGAAGGCACAATGGATAGAAAGTGAAAGGGTAATTGGATGTGGGTATGATCCAAGGCGGAAGAAGGTTTTCTTCACATTGGACTCAGAATTGGTGCATGTGATCCACTGTCAGTCAGAAGAATTTGGCACTCCACTATGTCCAACTTTGGCTGCAAACATAGACATTCAGGTTTTGGTTAATTTTGGACAAAGTGCATTCAAATATGCACCTGCAAATGCACAAAGAACACCAAATCCATGCTTCATAGCCCCACTTGTAAATTCTCCTGGTGCCACCCTCGGTTATGATGACAGCAAGGAGCTCTTCTCCATGGGAAGGATTGATTCTCAGTGGCATAACAGATCTGCAAACAAAGCAAATCAACCCAATGGGAATAATAGTCAAGTCTTAGATTTTGATGAGTCTGAGGCTGATCTATTTGAAATAGTCTTGGATGGTTCATGA 1392 0.426 MGQLIHVAVVAASLGCVSTLLLVFMWRWCHHKRDHRNFVEANSLTRMESLQAGIARLHQQQPAVYHQFDEKSKNKSKNKNKGNFYVFHNGVSRRGHLFNWDDHPYLVVDAVENGWSGFGFSNYKSNMPSPSKRSSLLGACAAAENGRESEAEISWEVCNGSAEYMQKVRLNPELKKVLHSNNSSNMSVASVIRTSLPLPGPPLGNYAFPQEAYFEITILCSGVGNHESVVGKKEGEKTKLLIEDGSNGVCDSDMVEEVKLGQKEGGGRSGSVMFSLGLTAGGGVPLRVPGSYPRSIGFNSNGSVFLEGMKLVMESEKAQWIESERVIGCGYDPRRKKVFFTLDSELVHVIHCQSEEFGTPLCPTLAANIDIQVLVNFGQSAFKYAPANAQRTPNPCFIAPLVNSPGATLGYDDSKELFSMGRIDSQWHNRSANKANQPNGNNSQVLDFDESEADLFEIVLDGS* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1842 463 Gene3D - 143 392 IPR043136 -
Vra6g1842 463 PANTHER SPLA/RYANODINE RECEPTOR (SPRY) DOMAIN PROTEIN 2 462 - -
Vra6g1842 463 PANTHER RAN BINDING PROTEIN 9-RELATED 2 462 - -
Vra6g1842 463 SUPERFAMILY Concanavalin A-like lectins/glucanases 287 384 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1842 Vra-Chr6 35017839 35020865 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1842 6 35017839 35020865 Vra6g1842 6 35017839 35020865 ECH
Vra6g1842 6 35017839 35020865 Vra5g1491 5 21584766 21587643 PCT