Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1830 ATGGGAGGTTGGGCAATTGCTGTGCATGGTGGCGCCGGTGTGGACCCTAATCTCCCACTCGAGCGCCAGGAAGAGGCGAAACAACTTCTCACTCGCTGTCTCAATCTTGGAATCTCTGCTCTGCGTTCCAATGTTCCCGCCATTGATGTTGTCGAACTTGTGGTGAGGGAGTTGGAAACGGATCCGCTCTTCAATTCGGGCCGTGGATCTGCCCTGACGGAAAAAGGAACGGTAGAGATGGAGGCTAGCATCATGGATGGGCCGAAACGGCGCTGCGGCGCCGTTTCGGGTCTTACGACCGTCAAGAACCCGATTTCGCTGGCTCGTTTAGTTATGGACAAATCCCCACATTCATACATCGCCTTCTCTGGAGCTGAAGAATTCGCCAGGCAACAGGGGGTGGAGGTTGTGGACAACGAATACTTTGTCACACCTGACAATGTGGGCATGCTGAAGCTGGCAAAGGAAGCCAACACAATCCTGTTTGATTACCGAATTCCGAACTCGGGGTACGAGACATGTGGATCCGGTGTGGAGAGTCCACTGCAGATGAATGGGCTCCCGATAAGCGTGTACGCGCCGGAGACCGTTGGCTGCGTGGTGGTGGACCGGGAGGGGCGGTGTGCTGCGGCGACGTCAACCGGTGGACTGATGAACAAAATGACCGGTCGAATCGGTGACTCGCCGCTGATCGGCGCTGGGACCTACGCTTGCGAGTTGTGTGGGGTTTCGTGCACGGGTGAGGGCGAGGCCATCATACGTGGCACTCTGGCGCGTGAGGTGGCAGCGGTGATGGAATACAAAAACTTGAAGCTTCATGATGCCGTTGATTTTGTGATCAAACACCGTCTGGATGAAGGAAAAGCTGGGCTCATTGCAGTTTCCAACACTGGTGAAGTCGCTTGTGGGTTCAATTGCAATGGCATGTTCAGGGCTTGTGCCACTGAAGATGGTTTCATGGAGGTTGCAATTTGGGAATAA 981 0.5474 MGGWAIAVHGGAGVDPNLPLERQEEAKQLLTRCLNLGISALRSNVPAIDVVELVVRELETDPLFNSGRGSALTEKGTVEMEASIMDGPKRRCGAVSGLTTVKNPISLARLVMDKSPHSYIAFSGAEEFARQQGVEVVDNEYFVTPDNVGMLKLAKEANTILFDYRIPNSGYETCGSGVESPLQMNGLPISVYAPETVGCVVVDREGRCAAATSTGGLMNKMTGRIGDSPLIGAGTYACELCGVSCTGEGEAIIRGTLAREVAAVMEYKNLKLHDAVDFVIKHRLDEGKAGLIAVSNTGEVACGFNCNGMFRACATEDGFMEVAIWE* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1830 326 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 325 IPR029055 -
Vra6g1830 326 PANTHER L-ASPARAGINASE 1 326 IPR000246 GO:0016787
Vra6g1830 326 CDD Asparaginase_2 5 318 - -
Vra6g1830 326 PANTHER PEPTIDASE T2, ASPARAGINASE 2, NUCLEOPHILE AMINOHYDROLASE-RELATED 1 326 - -
Vra6g1830 326 Gene3D (Glycosyl)asparaginase 196 326 - -
Vra6g1830 326 Pfam Asparaginase 4 325 IPR000246 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1830 Vra-Chr6 34791775 34793727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1830 6 260 Miscellaneous Gene Families AT4G00590 29.137 5.87e-18 82.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1830 6 34791775 34793727 Vra6g1830 6 34791775 34793727 ECH
Vra6g1830 6 34791775 34793727 Vra5g1483 5 21492177 21494359 PCT