Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1825 ATGGCATCGCCCGCAAAGAAGAACAGCAACACCAACACCACGCGTCCCCAGAGCAAGGCGAAGAAGAGAGCCGCAGCTGCCGTATGCCAGCTGCTCGGTAATGCCAAGAAGAAGCGCGTCGTTTTGGGAGACCTCACGAATGTCTCACGCGCCGTTGCCGTTTCGGAATCTCCGAAACCGAAACGGATAAAGGTTAAACTCAAGAATGTTGATGAAAGAAGCGACCCTCAACTCTGTGGCCCATACAGTTCTGACATATACCAGTACCTTTGCGGATTGGAGGTTGCTCCTCGTTTGAGACCGATGCCGGATTATGTTCAGAAGGTTCAGAACGACGTGGATGGTAACATGCGCGGTGTTCTGGTGGATTGGTTGATTGAGGTTGCAGAAGAGTATGGGCTGGTTTCGGATACGTTATACTTTTGTGTGGCTTATATAGATAGGTTTTTATCGTTGAAGGTACTGTCCAGACAGAGATTGCAGTTGCTTGGGGTTGCTGCAATGCTTGTTGCTTCGAAATATGAAGAGGTTAAGCCACCCGAGGTGGAGGACTTATGTTACATTACAGATAATACATACTCTAAGGAAGAGGTTTTGAATATGGAAGCCGATATATTGACGGCGTTGAAATTTGAATTGGGTGCTCCTACCGTGGGGACATTCTTGAGGAGATTCTGTGGAGTTGGTCAAGAGGGTGTTGATACTTCTGCTCTCCAGTTTGAGTTCCTTAGCTGCTACCTTGCAGAACTCAGTTTGTTGGATTATTACTTTGTAAAGTTTCTACCATCTTTGGTGGCAGCATCTGTTGTATTCTTAGCAAGATTTATGCTAAGCACAAAAACACATCCCTGGAATTCGGCCCTCCACCAACTCACTACATATAAACCCGCTGACTTGAAGGAATGTATTCTAAAGATACATGACTTGTACCTCAGAAGGAGGGGGCCTTCTTTGCAAGGTGTGAGAGAGAAATACAAACAGCATAAGTTCAAACGTGTGGCAACAACACCATCTCCTCCTGATATACCCCTTTCTTTTTTTGAGTTTTCAAGGGTAGATTCGTAG 1065 0.4582 MASPAKKNSNTNTTRPQSKAKKRAAAAVCQLLGNAKKKRVVLGDLTNVSRAVAVSESPKPKRIKVKLKNVDERSDPQLCGPYSSDIYQYLCGLEVAPRLRPMPDYVQKVQNDVDGNMRGVLVDWLIEVAEEYGLVSDTLYFCVAYIDRFLSLKVLSRQRLQLLGVAAMLVASKYEEVKPPEVEDLCYITDNTYSKEEVLNMEADILTALKFELGAPTVGTFLRRFCGVGQEGVDTSALQFEFLSCYLAELSLLDYYFVKFLPSLVAASVVFLARFMLSTKTHPWNSALHQLTTYKPADLKECILKIHDLYLRRRGPSLQGVREKYKQHKFKRVATTPSPPDIPLSFFEFSRVDS* 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1825 354 Gene3D - 99 214 - -
Vra6g1825 354 PANTHER CYCLINS 26 350 IPR039361 -
Vra6g1825 354 SMART cyclin_7 220 308 IPR013763 -
Vra6g1825 354 SMART cyclin_7 123 207 IPR013763 -
Vra6g1825 354 PANTHER CARBOXY-TERMINAL DOMAIN CYCLIN 26 350 - -
Vra6g1825 354 SUPERFAMILY Cyclin-like 216 340 IPR036915 -
Vra6g1825 354 SMART Cyclin_C_2 216 339 IPR004367 -
Vra6g1825 354 ProSitePatterns Cyclins signature. 118 149 IPR006671 -
Vra6g1825 354 MobiDBLite consensus disorder prediction 1 23 - -
Vra6g1825 354 PIRSF Cyclin_A_B_D_E 1 344 IPR039361 -
Vra6g1825 354 CDD CYCLIN 117 206 IPR013763 -
Vra6g1825 354 MobiDBLite consensus disorder prediction 1 19 - -
Vra6g1825 354 Pfam Cyclin, C-terminal domain 216 338 IPR004367 -
Vra6g1825 354 Gene3D - 85 335 - -
Vra6g1825 354 Pfam Cyclin, N-terminal domain 85 213 IPR006671 -
Vra6g1825 354 CDD CYCLIN 216 307 IPR013763 -
Vra6g1825 354 SUPERFAMILY Cyclin-like 74 213 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1825 Vra-Chr6 34716243 34719523 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1825 10 348 Core Cell Cycle Gene Families AT1G47230 55.249 5.28e-139 397
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1825 6 34716243 34719523 Vra5g1470 5 21375785 21378604 PCT