Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1821 ATGGCGTCGAGTTTTGACCGGTGGGAAAAGGATCCTTTCTTTAACGCCGCCGAAGAAGTTCAAGAGTCTGCAGACAGGATGGAATCTACGTATAGGATATGGTTACACGCAACAAAAGATGCGTCCAGCATGTGGAACTCTGATGAAGTGTGTAGAGATCTACATATTGCACTTGGCACTGCCAAATGGCAGTTAGAGGAATTTGAGCGGGCAGCGATGTCAAGTTATGGCAAAATTTCAAGTGATGAAGCGAGAAGTAGGCACCAACAATTTATCACTGCCATTGAGGATAAGATAATGAAAGTTGAGCATTCGATAAGTGAATCGGTAGGCAAGGCATCTCTGCCTTGGTTGCGTTTAGACGAAGGAGAACAGGATGAGCTTGCTTTGTTTCTTTCGGGAAAACCAGAAATTAACAGCAGGGACATTGAAGATCCACCAGTGGCTAATTGTTCGAAGGATTTTCATGTTTCATATGGATGGGGTGAACCAAAGGGGGAGATATCACGTGGGCACCGCAGGGTAGCCAGTGCTAGTGCTGATATTGGATTTTGGAAAGTTTCAGTTCATGATGATGCACAGCAGTGGAGTTCATCAAGTGGTTCTTCTGGTCCACTGCATAATAAGGCACCCAGTTTATCAGGATTTCTTAGTTCAATGGAATCAGTCTCTAAGTTGAATTGGTCTATGAATGCTTATAAAAAGCTGAAAGCAGTGAATCCTCATACAGAAACTGATAGCACACTACTTCCAACTGCTGAATTCAATAGGGGCAACAGTGCAAACTGTGAAAGTAAGAGTGGCCTTGATAGCTGTGACGAATGCTATGACAAACAACTCTATGGATGGTATGGTGCTATTCGGAGAAAGCTTCAAAGATCTCAATACCAAATTCAATACAGGCACCCTGTTCGAATAGCTGTTTGGATTTTTTTTCTCCTTTGTTTTATAGCATTGATTGCATTCCACACATTGTAG 978 0.4274 MASSFDRWEKDPFFNAAEEVQESADRMESTYRIWLHATKDASSMWNSDEVCRDLHIALGTAKWQLEEFERAAMSSYGKISSDEARSRHQQFITAIEDKIMKVEHSISESVGKASLPWLRLDEGEQDELALFLSGKPEINSRDIEDPPVANCSKDFHVSYGWGEPKGEISRGHRRVASASADIGFWKVSVHDDAQQWSSSSGSSGPLHNKAPSLSGFLSSMESVSKLNWSMNAYKKLKAVNPHTETDSTLLPTAEFNRGNSANCESKSGLDSCDECYDKQLYGWYGAIRRKLQRSQYQIQYRHPVRIAVWIFFLLCFIALIAFHTL* 326
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1821 325 SUPERFAMILY t-snare proteins 10 108 IPR010989 GO:0016020|GO:0016192
Vra6g1821 325 Gene3D - 9 110 - -
Vra6g1821 325 PANTHER OS05G0443700 PROTEIN 1 324 - -
Vra6g1821 325 Pfam Syntaxin 6, N-terminal 11 102 IPR015260 GO:0016020|GO:0048193
Vra6g1821 325 PANTHER EXPRESSED PROTEIN 1 324 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vra6g1821 Vra-Chr6 34675681 34678350 Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1821 6 34675681 34678350 Vra6g1821 6 34675681 34678350 ECH
Vra6g1821 6 34675681 34678350 Vra5g1461 5 21307485 21310628 PCT