Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1818 ATGGACCCATCTATCATGAAGCTTCTAGAAGATGACGAGGATGAAACAATGCATTCAGGGGTGGATGTGGAAGCCTTCCAGGCTGCTCTAAATAGAGATATAGGAGGAGATGTGTCTGCTTCTCAGTTTCCTGGTTCAGATGCAGTGTTGTCTCAAGGAAGCAATAATACATCAAGCCAATCTTCATCACAGTGGCCTACTTCTAACCATGACAGCCAAAGTGATGGTCAAAATCAAGAACCTAAAACTGCACAAGAGCAACATCCATCTGAGATGGAGCCAAAGCAACATGGGTCTCTTGGCGAACACCTTCAGCATGTTGCTTCTCAGGATGTAAATAATATTCATTTATCACAGAAACAATCTCAAGATGACAGTCACCAAACACCTGCTGTACAAGTTCCCCTTCACAATTCTCAAACTATCGGAATTCATAATTCTGGAAAAGATTCAGTCCTTAATAAAGAAGTAGTAAAGAGTCATAATCCCAGCAGTGAATCTCAGTATGCAAAGTTGCAGCAGATGAGTAATCAACAGGCTACAGTCTCTGAGCAGCCAAGTAGCCAAGTAAATCGCAGTAATAAACAAGTACCATTTGGCCTGTTGCTACCCATCTTGCTTCCTCAACTTGCCAAAGACAGAGCCATGCAACTTCAAACCTTGTTTACTAAATTGAAGAAAGACGAAATACCGAAAGACAGTTTTGTGCGGCTTATGAAAGGTATCGTAGGGGACCAGATGCTTAGATTAGCATTAGCAAAGGTGCAAATGCAACCTCAGGCAAGGCCCAATCAAGCATCTGCTGGGCAGCAGCTTCCTGTAAGGATGCCAACTGTTAGTTCAGGTGCTAGACAATTGAACGATCCACATGCTTTAGCACAGATGCATCAAAGAAGTATGAATGTTGCTGTTGACCAATCTCGCATGAGTTCTTCAGCTGGCCAAACCATGGATAGCAATGCTAGAAAATCTCAGGAATTTGATGTTAAAATAGAATCTCAAGGATTGCAACCAAACCAGTTGACGTCTTCCACTTCCAACTCAGTAGCTCAAGAAACAGAAAGAGCATCAGTTCACATACAAGGGCTCAATAAGCAGCAGCAACATCATCTACATTTTGCATCAGCATATGGAAACAGTGGTGGTAACTATAACCCTTATTCTGGGACAACAGGCAGTTCCACTTCGTCTATCAAACCGCAATCACATGATTCACACATGAGTCAAATTCCTCATCAAAGTATTGGTTCAAATCACTTAGGTGGGTCAACACATGGTTTGAGTGTAATTGGTATGCCAAAACTTGAACAGCAGAATTCTTTCAATGATCCCAAGAGACTGCCAGGTGGATCTGTGTCCTCTGCTGTAAACAATGCAGCATCTCAACAAACTTCAAATGCTTGGCAACCATCAACAAACAAAGAACAAAATCTGGGCTTAATGTCATCTGTTTCTTATGTCAAGAAGGAACCTGGTGACATGTCTACTGAGCAGCAAAATAGGCATAATTTGTCTAAATTGCATGGGTATTCTTCTGTTAATTCTGCTCAGCTTGAACAGAGTGGTGCCAGTCAAGGAGCTCTAAAAGACGAGTTTTCAAGAGGTCTTCCAGCATCCACAAGCATGCCACCTACAACATCTACTGGCTTGCTACCACACAGTTCTGCTTCTGCTTCTGCTGTGACCCACCTAGATTCCAGTGTCTTGCTAAGCTCTCAGATTCCATCAAATGCTTCTGGAATTGCTGCAAGGCCATCTCTTAAAAAGTCTGCTGCTACCCAAAAGAAACCACTTGAAGCACTTGGTTCATCACCTCCTCCTTCTAGTAAAAAACAAAAAACTTCTGGGGGATATGCTGAACAAAGCATTGAACAACTTAATGACGTCACTGCTGTTAGTGGAGTTGACCTCAGGGAAGAGGAAGAGCAGTTATTTTCAGGGCCCAAAGAGGATAGTCGAGTGTCAGAAGCATCTCGAAAGGCTGTGCAAGAAGAAGAGGAAAGGCTGATCTTGCAGAAAGCTCCATTGCAAAAAAAATTAATTGACATCATGGCCAAGTGTGGCTTGAAGGGTATGAGCAATGATGTGGAGAAATGCTTGTCACTGAGTGTGGAGGAAAGGATGCGCGGACTGATAAGTAACCTGATTAGATTATCAAAACAGAGGGTTGATTTTGAGAAAACGAGACATCGGACTGTTGTCACTTCAGATGTTCGGCAGCAAATCATGACAATAAATAGGAAAGTAAGGGATGAGTGGGAGAAAAAACAGGCGGAAGCAGAGAAGCTTCGGAAACTAAATGATGTTGACAGCAATACTGGAGGTGATGGTGACAAGGATAAGGACGACGGCCGTGCTAAATCAACAAAGGTGAACAAGGAAGAGGATGACAAGATGAGGACAAATGCTGCAAATGTTGCTGCTCGTGCTGCTTATGGGGGAGATGACATGCTGTCGAAGTGGCAACTTATGGCTGAGCAAGCCAAGCAGAAACGTGAAGGGGGAGTAGACGTGTCATCTAGTTCTCAACCAGCTAAAGATGTGAACCGCAAATCTTCATCAACATCTGAAAGAAGTACAAAGGATAACCAAGAAGGGGAAAAAAGAGGTTCAACCCCTTTTCTAGCAAGCTCAGTGGCCAGAAAACTTGGGAAGAGTCATGCCATGGCCCCTCAAACTAGGGTAGCTCGAAGCATCTCTGTCAAGGATGTGATTGCAGTCCTGGAGAGGGAGCCCCAAATGTCTAAATCCCCACTCATACATCGCTTGTACGAGAAAATTCATTCTGAAGCCCCAGTTGAACAAGGTTAA 2811 0.4344 MDPSIMKLLEDDEDETMHSGVDVEAFQAALNRDIGGDVSASQFPGSDAVLSQGSNNTSSQSSSQWPTSNHDSQSDGQNQEPKTAQEQHPSEMEPKQHGSLGEHLQHVASQDVNNIHLSQKQSQDDSHQTPAVQVPLHNSQTIGIHNSGKDSVLNKEVVKSHNPSSESQYAKLQQMSNQQATVSEQPSSQVNRSNKQVPFGLLLPILLPQLAKDRAMQLQTLFTKLKKDEIPKDSFVRLMKGIVGDQMLRLALAKVQMQPQARPNQASAGQQLPVRMPTVSSGARQLNDPHALAQMHQRSMNVAVDQSRMSSSAGQTMDSNARKSQEFDVKIESQGLQPNQLTSSTSNSVAQETERASVHIQGLNKQQQHHLHFASAYGNSGGNYNPYSGTTGSSTSSIKPQSHDSHMSQIPHQSIGSNHLGGSTHGLSVIGMPKLEQQNSFNDPKRLPGGSVSSAVNNAASQQTSNAWQPSTNKEQNLGLMSSVSYVKKEPGDMSTEQQNRHNLSKLHGYSSVNSAQLEQSGASQGALKDEFSRGLPASTSMPPTTSTGLLPHSSASASAVTHLDSSVLLSSQIPSNASGIAARPSLKKSAATQKKPLEALGSSPPPSSKKQKTSGGYAEQSIEQLNDVTAVSGVDLREEEEQLFSGPKEDSRVSEASRKAVQEEEERLILQKAPLQKKLIDIMAKCGLKGMSNDVEKCLSLSVEERMRGLISNLIRLSKQRVDFEKTRHRTVVTSDVRQQIMTINRKVRDEWEKKQAEAEKLRKLNDVDSNTGGDGDKDKDDGRAKSTKVNKEEDDKMRTNAANVAARAAYGGDDMLSKWQLMAEQAKQKREGGVDVSSSSQPAKDVNRKSSSTSERSTKDNQEGEKRGSTPFLASSVARKLGKSHAMAPQTRVARSISVKDVIAVLEREPQMSKSPLIHRLYEKIHSEAPVEQG* 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1818 936 MobiDBLite consensus disorder prediction 605 620 - -
Vra6g1818 936 CDD TAF4 621 922 IPR007900 GO:0005669|GO:0006352
Vra6g1818 936 MobiDBLite consensus disorder prediction 764 802 - -
Vra6g1818 936 MobiDBLite consensus disorder prediction 1 20 - -
Vra6g1818 936 MobiDBLite consensus disorder prediction 384 411 - -
Vra6g1818 936 MobiDBLite consensus disorder prediction 538 554 - -
Vra6g1818 936 MobiDBLite consensus disorder prediction 36 101 - -
Vra6g1818 936 ProSiteProfiles RST domain profile. 190 261 IPR022003 -
Vra6g1818 936 MobiDBLite consensus disorder prediction 581 620 - -
Vra6g1818 936 MobiDBLite consensus disorder prediction 333 353 - -
Vra6g1818 936 Pfam Transcription initiation factor TFIID component TAF4 family 626 922 IPR007900 GO:0005669|GO:0006352
Vra6g1818 936 Gene3D Histone, subunit A 671 716 IPR009072 GO:0046982
Vra6g1818 936 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 4 42 928 IPR045144 GO:0005669|GO:0006352
Vra6g1818 936 MobiDBLite consensus disorder prediction 438 477 - -
Vra6g1818 936 MobiDBLite consensus disorder prediction 44 85 - -
Vra6g1818 936 MobiDBLite consensus disorder prediction 533 554 - -
Vra6g1818 936 MobiDBLite consensus disorder prediction 826 896 - -
Vra6g1818 936 PANTHER IP01149P-RELATED 42 928 - -
Vra6g1818 936 MobiDBLite consensus disorder prediction 834 850 - -
Vra6g1818 936 Pfam RCD1-SRO-TAF4 (RST) plant domain 193 256 IPR022003 -
Vra6g1818 936 Coils Coil 746 766 - -
Vra6g1818 936 MobiDBLite consensus disorder prediction 851 868 - -
Vra6g1818 936 MobiDBLite consensus disorder prediction 86 100 - -