Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1810 ATGCGAGGAGAGCACAGGGGACTCGTGCACTGCGTCGTGAGTCAAGTCCTGCCGTCACTCGCCATGGCCTCGGTGGAGCAGCCTCCTAAGAAGCGAAAGCTCTACGAGCCTTTACCGGAACCGCCACCGCCTTCGCCTCCGTCACCGCCGCCTCCTGCAACCGAACCGACCCCTCCCTCTCCACAAACCCTACCTCCGCCGTCCCAGGAAGAGATTCTCGCGAAGCGGCGGAACAAGGACGAAATTCGAAGCGTCTACGAAGGTTACAAGCGGATTCAGCGTTGCTTGCTTCAGAAAGACGCTCCTTCCTCCATGGCAGACCTTGAACAGAGTTATCTCGTGCTCATAACTTCTTCCAGAGGTTGTATGAGTGTACAAAGAATTGTGGCCGATCTTATTCCTCGGTATGCATGCCACTGTCCAACAGCCTTGGAAGCTGCAGCTAAAGTTGTCATTAATATGCACAACTTTAGTTTGGCATTGATTAGTAGAGGAGAGGATTCCAACGGTATTGCATTTGAAACTGCTAGAGCCTGTATTTGTGGCCTAGCTGATGTCTGCTGTGTTGCTTCATCAGTGGCACCAACATCAGCTGTAATTAGAGGAATTTGCTCAGCAGTTTTTCAGAATGTGCTCACCTTTTTTATAGCCTTATGTGAAGGAAAGGATGACTTACATATGGTTGACAAGAATTTCCTGAATATGCAAGATAACCCCGAGGTCTTTTCTGAGTTGAAACAAAAGGTTTTAGAGGAGGATGAATCTCCATTGTCTAAACTGTCCAAATTTCGAGTATTATGTCTACTTCGGATTTTTTTCTCGTGTCCAAAAGATTTGCTTGCAGCTTGTTTGGATCTCTTAGGTTCTGCCACAAAAGAGGGAACTAACAATGAAGGAAAGCATTTTCTGAGCCAGGTGACTAGCATGTTTGATGATGATAAAACAGTTCATCTTTTGGATAGCACAATTAGTAGACCTAAGTCATGTACAGATTCTACTGGGTCAGGAATCAGAGATGATGAGGTTGGTGAGGAAATTGTGACCGAAGACAACCATGTTTCTGGTGTTGATTCATCCGCTGGCAAGAGCTGCTTGCTTATACGGGTTCTTGACAAGGATCCCCCACTCCGGAAATGGATGTTGTGTAGGTGTAAGAAGTTACTCGACTTGCTCCCAAATGCATCACAGGAAATTCTGTCAGTACTGCAAGGAACTATTGGAACGTTTGCTCAACAAACAGATTTGGAAGACTGTCAAGCAGATAGTGATGAAGATAAATCTGATTCTTCAATTTACATGAATAGTAAGAAGTATATGGTTCCTAGAATCTCTGAGGAACATGAAAGCATTGGTGAGTCATCTGGAAAAGGCAGCAATTTGAGAGTTTATGTTGGTTCTACTGATGGTTTTACTGATAAGGTTTCTGATAAATATGTGATGGCTCATAGCTCTGCAGTTTCTCTTGACAATGCGCCAGCATTAAAAGTGGGTTTACAGTATGATAATGGAGTCTCAAAGCCCATGAACATTGGGGTGGGGGAAGAAGGAAATATGCCAAATGTTAGATGTTCCACACCTAGGGACTCAGTAAGCCATCAAGTATTTTCACCTGCAGTTAGAACACCAGTAAATTTTAGGAGTAATTCATTTGATGGTAGAAATGACTTTCTGAATGTAGAGAAAAATCAAGTCTCGAGTATGAATTTCAGTTCACCTCCGTTGAGATCCTCTAGTGGATCTGCTAGTAATTCTTTGGCATCTCCTAATCATCATTTTATGTCACCAACTGATTCAACAAAAGGTCAAATAGTGTGGTGCTGTGATGGGGATCCTGCTGCCATGGATATTGTCTCTGCTTCTAGGCTGCTATGGATAGGTTATGTGGGACCTGATGTGCCCGAAAGTCATATTAGGTTTCACCTAGAAAGATTTGGTCCTATTGAAAAATTTATTTTCTTCCCAGTTAAAGGATTTGCCTTAGTCGAGTACAGAAGGATCATTGATGCAATAAAAACTCGACACTGTTTACCTGGATGTTTCCCTTGCCGTGTAAAGTTCATGGATGTAGGACTTGGAACTAGGGGTGCAATGAATGGTGTTGCAGTTGGCTCTAGTTCTCATATTTATGTTGGAAATATTCCCAGTCAATGGGCCAAGGATGAGGTCATGCATGAAACAAGAAAAATGATCCACAAGGGTCCTCTTGCATTCATTGACCTTAGCTGTGAGTTTGCATTACTTATGGAATTTGAAACGCCTGAAGAAGCTACAGCTGTCATGTTGCATCTGAGACAACTGCGAAGAGAAAGAAGTAACTACAACCAGCATTTTGGTCCAGCTCCAGGAACAGTTAATGTTGGAATTGGGCATGCTTATATGGATGGTCCAAGACCTGTACCTCCCCCTCCCCCACCCCCTCCCCATCTTGAGCTTCAAGTTAACAATTCTGCTGGATCACCACATGCTCGAACTCTACCAGGGAGCCCTGCAGATAGCAGTCGAACAGGGATGTCTCACTTGTCGAACTTACTTGCTTCATTGCGCTCAAAGTATAATATTAATCAAAACCAAAGTCTCAATGATAATTATATGACTGGCAATAATTGTCCTTCCATGCGTGAAGAAGATATGGTGCCATCCAGCACTCTTTGCGTTACTATTCCACATTGTAGTAGCTCTATTTTCCTTTCAGATGATGAGTTGATGTCCATTTGCAATCTTGCCATTGGAAACGCTGGATCCATTGTGCAGTTGACACAAGCAAGCACACAGATGGGGTGCAGTTGGTTTGTCGAATGCAGTAATATTGATGGAGCAGTTTCTACTCTAAAGAATCTCCGTGGTTGTCCTGGATTGTTCTTTCAGATAGAATTCAGCAAACCTGGACATCAGAACACTGCACCATTTTCAGTTAAACCAGAGAACAATTCTATGGAGCTTGTGTCCCCCAGAATAAATTCTGAAAATCATACTAGTGGAATACAGAGTGCACCTCTGCCTCATTCAAACTGGCACTTTCCTGGTTCTAGGGAGATGTCAGAGGTTGGGGCAAGGAAACCTGACGGTTATGATAATTTGTCTCAGGATCCTCATCAAGGAGGTAATGTTCCACATTCACACTCTGGAGCACATGGACCTTCCATCCCACCACTGCAGCAAATTCAGTCATCTACTTTTTCTCACCCTGTTTATGCTCCTCTGAATGGTCCATGGGATCATCGGGGAATTAATAATCATTTTCCTGTCAACCAATTCAACACAGGAGTAATGCCAAATAATTTTCATGGTAATGCTGTTGTAAGTCCTTTCATTCCTGCTTCAGTGACTCCACTTGCTCAGATACAAGGAACTCCAATGCATCCCTATAACCAGCAGGTGCCTCCATCAATCGTACCACCACCTTTATCATCCTTACCACCTCCGCAGCCTGAAATGCCACCTCCACTTCCTCCTTCTCCACCACCGTTACCCCAGGTTCAGCCTCCCTTGGTTCCTCCACTGCCTAGTTCTCCTCCTCCCCCTCCTCCTCCGCCACTGCCTGTCCAAGAACTAGTCAATTTAGAATGTTCTGTACAGTCTTTGCAGTATCAATGGCAGGGGAATCTATGTAAAAGTGGGGTCAATTACTGTACAATTTATGCATGCAAGGCAGATTCAGCTATTTGCCGATACTCAAATGCCATACCTGAGCCTGCTGAGTGGCCCACAAAATTAGACATGACAAAACGCACGGATCTTAGACATGTAAAATCAACATTTGCTGCTACACCATCTCATAGAAGGGAAGTGTGCCGTCTGATCCCATCTTCCACTAGTGATCACAAAAGGTTTCAGGATTTCATATCATACTTAAAGCAGAGGGACTGTGCCGGGGTTATTAAAATCCCAGCTTCAAAATCCATATGGGCAAGGCTGCTATTCATTCTCCCCCACTCACTTGAAACTTGCTCTTTGCTTTCTATTGCACCTGATCCCTCAGATTGTCTCATTGCTTTGGTTCTTCCCAAAGAAACGAACTTTGAGTGGATATGA 4032 0.4402 MRGEHRGLVHCVVSQVLPSLAMASVEQPPKKRKLYEPLPEPPPPSPPSPPPPATEPTPPSPQTLPPPSQEEILAKRRNKDEIRSVYEGYKRIQRCLLQKDAPSSMADLEQSYLVLITSSRGCMSVQRIVADLIPRYACHCPTALEAAAKVVINMHNFSLALISRGEDSNGIAFETARACICGLADVCCVASSVAPTSAVIRGICSAVFQNVLTFFIALCEGKDDLHMVDKNFLNMQDNPEVFSELKQKVLEEDESPLSKLSKFRVLCLLRIFFSCPKDLLAACLDLLGSATKEGTNNEGKHFLSQVTSMFDDDKTVHLLDSTISRPKSCTDSTGSGIRDDEVGEEIVTEDNHVSGVDSSAGKSCLLIRVLDKDPPLRKWMLCRCKKLLDLLPNASQEILSVLQGTIGTFAQQTDLEDCQADSDEDKSDSSIYMNSKKYMVPRISEEHESIGESSGKGSNLRVYVGSTDGFTDKVSDKYVMAHSSAVSLDNAPALKVGLQYDNGVSKPMNIGVGEEGNMPNVRCSTPRDSVSHQVFSPAVRTPVNFRSNSFDGRNDFLNVEKNQVSSMNFSSPPLRSSSGSASNSLASPNHHFMSPTDSTKGQIVWCCDGDPAAMDIVSASRLLWIGYVGPDVPESHIRFHLERFGPIEKFIFFPVKGFALVEYRRIIDAIKTRHCLPGCFPCRVKFMDVGLGTRGAMNGVAVGSSSHIYVGNIPSQWAKDEVMHETRKMIHKGPLAFIDLSCEFALLMEFETPEEATAVMLHLRQLRRERSNYNQHFGPAPGTVNVGIGHAYMDGPRPVPPPPPPPPHLELQVNNSAGSPHARTLPGSPADSSRTGMSHLSNLLASLRSKYNINQNQSLNDNYMTGNNCPSMREEDMVPSSTLCVTIPHCSSSIFLSDDELMSICNLAIGNAGSIVQLTQASTQMGCSWFVECSNIDGAVSTLKNLRGCPGLFFQIEFSKPGHQNTAPFSVKPENNSMELVSPRINSENHTSGIQSAPLPHSNWHFPGSREMSEVGARKPDGYDNLSQDPHQGGNVPHSHSGAHGPSIPPLQQIQSSTFSHPVYAPLNGPWDHRGINNHFPVNQFNTGVMPNNFHGNAVVSPFIPASVTPLAQIQGTPMHPYNQQVPPSIVPPPLSSLPPPQPEMPPPLPPSPPPLPQVQPPLVPPLPSSPPPPPPPPLPVQELVNLECSVQSLQYQWQGNLCKSGVNYCTIYACKADSAICRYSNAIPEPAEWPTKLDMTKRTDLRHVKSTFAATPSHRREVCRLIPSSTSDHKRFQDFISYLKQRDCAGVIKIPASKSIWARLLFILPHSLETCSLLSIAPDPSDCLIALVLPKETNFEWI* 1344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1810 1343 MobiDBLite consensus disorder prediction 567 598 - -
Vra6g1810 1343 PANTHER ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 2 ASC-1 COMPLEX SUBUNIT P100 22 1342 - -
Vra6g1810 1343 Pfam SPOC domain 1192 1334 IPR012921 -
Vra6g1810 1343 MobiDBLite consensus disorder prediction 793 837 - -
Vra6g1810 1343 MobiDBLite consensus disorder prediction 1116 1179 - -
Vra6g1810 1343 SUPERFAMILY RNA-binding domain, RBD 610 680 IPR035979 GO:0003676
Vra6g1810 1343 PANTHER NUCLEIC ACID BINDING PROTEIN 22 1342 - -
Vra6g1810 1343 MobiDBLite consensus disorder prediction 24 68 - -
Vra6g1810 1343 MobiDBLite consensus disorder prediction 38 66 - -
Vra6g1810 1343 Gene3D - 612 691 IPR012677 -
Vra6g1810 1343 MobiDBLite consensus disorder prediction 795 810 - -
Vra6g1810 1343 MobiDBLite consensus disorder prediction 1125 1179 - -
Vra6g1810 1343 MobiDBLite consensus disorder prediction 812 837 - -
Vra6g1810 1343 MobiDBLite consensus disorder prediction 988 1053 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1810 6 34553928 34565993 Vra6g1810 6 34553928 34565993 ECH