Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1808 ATGAAGAGGAACACACACATGATCATGTCCCTTTCCCCTGCCACTCCAAGGTCAGCAGCAGCAGCAGCACCTCCAATGGATCCCAAAATTTGGAGCAAATTGCCACCTGAAATCCTTGAATACATCCTCTCCTTTCTTCCTCTCAAAACCTTCTTGAATCTCAGATCCACTTGCAAAGGTTTCTGGCCTCTCATATTCTCTCCTTCCTTCGTTTCCAAACACTCTTCTCCTTCTTCTTCCTCTTCTTCTTCTTCTTCTTCACCCTTCTCTTCCTTTCTCTTACTCTCACACCCTCAATTCCACCGCCACTTCCCTCTCTACGATTGCACACTCGGCACGTGGCGCAACATCTCTCTCTCGCTCTCTGATTCTTCACTACAATGTTTCCCTTCCCTCACCACTCTTGTCACCTCCGGTGGTCTCTTCTGCCTATCTGATTCGCTATCATGCTCCTTGATAGTGTGCAACCTTCTGGCCAAGTCTTCTAGAAAGATTCAGTACCCAAGTTTGTCTCTTCACTTGGAGCATCTCACTTTTGTCACAACACCCACAGGGTACACCATATTTGTTCTCTGCTCAGAGGCTGCTACGAACTGTGCCTTTGTTTATGACTCAAATGTTCGAACTTGGAAACGGTTTGACGGTTTTAGTCCGGTTCTCGGCGACAATCATCACCAAAAAGGTGTTCTTTTCAAAGGGGGTTTATATTTTGCGACCCCGGAACCGTTTTCTGTGGTGATATTTGATTTGGGTAGTGGAAGGTGGGAAAAACCCATTGGGGGGTTACCGAGTCAGCTCACTTTTGTTCGATTGGTGAATGACGGAGAGGGTAAATTGTATATGATTGGAGGGGTTGGGAACAATGGAATCTCGAGGAGCATCAAGTTGTGGGAATTGGGTGGAGATGGGAATTGGACGGAAGTGCAAAGTTTGCCTGATCTTATGTGCAAGAAGTTTGTGGCTGTGTGCTACCATAACTATGAACATGTTTATTGCTTCTGGCATGAAGGGATGATCTGCATTTGCTGCTACACTTGGCCAGAGATCTTGTATTTCTTGGTTTCAAGGAGGACTTGGCATTGGCTTCCCAGGTGTCCCTCTTTGCCTCTCAAATGTAGCTGTGGTTTCAAGTGGTTTTCTTTTGTTCCAAATCTCTACGCTTCAGTCTGA 1170 0.4615 MKRNTHMIMSLSPATPRSAAAAAPPMDPKIWSKLPPEILEYILSFLPLKTFLNLRSTCKGFWPLIFSPSFVSKHSSPSSSSSSSSSSPFSSFLLLSHPQFHRHFPLYDCTLGTWRNISLSLSDSSLQCFPSLTTLVTSGGLFCLSDSLSCSLIVCNLLAKSSRKIQYPSLSLHLEHLTFVTTPTGYTIFVLCSEAATNCAFVYDSNVRTWKRFDGFSPVLGDNHHQKGVLFKGGLYFATPEPFSVVIFDLGSGRWEKPIGGLPSQLTFVRLVNDGEGKLYMIGGVGNNGISRSIKLWELGGDGNWTEVQSLPDLMCKKFVAVCYHNYEHVYCFWHEGMICICCYTWPEILYFLVSRRTWHWLPRCPSLPLKCSCGFKWFSFVPNLYASV* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1808 389 PANTHER F-BOX/KELCH-REPEAT PROTEIN 30 387 - -
Vra6g1808 389 SMART fbox_2 34 74 IPR001810 GO:0005515
Vra6g1808 389 PANTHER F-BOX/KELCH-REPEAT PLANT PROTEIN 30 387 - -
Vra6g1808 389 ProSiteProfiles F-box domain profile. 28 74 IPR001810 GO:0005515
Vra6g1808 389 Pfam F-box domain 31 61 IPR001810 GO:0005515
Vra6g1808 389 Gene3D - 30 73 - -
Vra6g1808 389 SUPERFAMILY Kelch motif 100 372 IPR015915 GO:0005515
Vra6g1808 389 SUPERFAMILY F-box domain 20 71 IPR036047 GO:0005515
Vra6g1808 389 Gene3D - 179 377 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1808 Vra-Chr6 34535059 34536754 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1808 6 34535059 34536754 Vra5g1454 5 21256771 21258317 PCT