Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g1797 ATGGCATCCAAGGACCCGACACTCCTCAAACTCCACTCAGCACGCTCCGACCTCAAAACCCTCCTCCAAGCCTCATCGGAGGCACAACACGATATCAAAGAAACTGAGAAAAGGTTTTCTCTCTACCACCAATCTCTCTCGACCGCCTCCAGAAGAATCCTCCCTTTGCAGTCCCTAACCATGTCCAGAAAAGCCCTTGACGCCAGGATCACCAGAGCGGTTTCCCCGGCGGTGGAACTCCTCAACACGTTCAAGCGCACGGAGGGTCTCCAGGCCAAGCTCGTCACCTTCTCGGCCGAGCTGTCGTCGGAGAAGTCGCAGCAGAGGAGGTTGGAGAAGCTGGTGGAATACGTGGCGTGCGTGGAAGAAGTGAAGGAAGGGATAGAGAACATATGCGAGGAGGTGGAGATGGTGGTTCAGAGGCTGCAGGAGGTGGTGGAATTTGTGAGCAGGACAAAGGCTGCGGATCAGGACAGGGACATGAGGCTGAAGGATGCGTTGGTGACGCTGAAGGTGCTGTATGAGAGAGAGGTGGATGAGATGAGGTTTGAGGGGTTGTTGGATCAGGCGTTGCTCCATGTGCAGGATGAGTTTGAGGAGCTGCTGCTGAGGATGAAGCACCGGAACATGAAGGATTTGTTGCACCAGCATGGTGGCGAAGAAAGGGAATTGGGGTCGGAGATGGAGGTTGAAACCCTCAGAAGAATTTCAACCACCCTTGCTGCCAATGATTGCATGGACATTTGCATTGATATATACCTCAAGGCGAGATACAGAAGAGCTGCGAAGGCACTGATGAAGCTAAATCCTGATTACCTTCGAACATACACACCAGAAGGAATCGACGAAATGGAGTGGGAAACCTTAGAAACAGCCATAACCCTTTGGATTCAACACTTCGAAGTGGCAGTCAAGAAGGTGCTGTTTTCAGAAAAGAAACTATGCGAGAGAGTCCTGGGCGATTTCATGGAGGGTCTAGTTTGGCCAGAATGCTTCATCAAAATCTCCGACAAGATCATGGCCGTGTTCTTCCGCTTCGGAGAAGGCGTGGCCCGAAGCAGCAAAGAGCCCCAGAAGCTCTTCAAACTATTGGACATGTTTGAATCCCTAGAAAAACTCAAACCCCATATATCACAAATCTTCGAAGGAGAACCTGGCGCAGACATATGCACGCGGTTCCGTGAGTTGGAGAAGCTCATCATCGATGCTTCGAGCAAAGTCTTCTGGGAATTCGGACTCCAAATAGAAGGCAACATCGACGGTCTCCCCCCTCCGCAAGACGGTTCCGTTCCGAAGCTGGTACGTTACGCCATCAACTACCTCAAATACCTAACGGCGGTCAATTACAAAACATCCATGATCAAGGTTCTCCGAACACAACAAACGTGGAGAGGCAAAGATGGTAGTAGTAGTATTGAAACAAGTGGCAAGGAGACGTTAACGGACGAGGGTTTGTTGAAGCATGCGATTTCCAACGTGATGGAGGCGCTTCAGAGGAACGTAGAGTCGAAGAGAGTGTGTTGTAGGGACAAGGTGTTGGTGCATGTGTTCACGATGAACACTTATTGGTACATATACATGAGGACGAAGAACACGCAGCTTAGTGAGGTGTTGGGTGAGAAGTGTATGAAGGAGGAATACAAGGCTGTGGCGGAGGAATGCGCTTACTTGTATCAGAAGCAAGCATGGGGGGCTTTGGTGAAGGTTTTGGATGGTGAGGATGTGAGGGAGGAAGGAAAGGGGAGTGTGGGAAGAGTGGTGAGTGAAAAGGTTGATGCTTTCTTCAAGGGTTTGAACGAGGTTTGTGAGAGACATGCAAGAGGGGTGTATAGTATACCTGATGTTGATTTAAAGGAGCAGATGAGAGAGGCTACAGTGAGGCTTGTGGTGCCTGCATATGCAGAGTTTTTGGAATGTTATTCAGAGTTTTTGAATAAGAAAGGGTACCCTAGTGTTGAGAGGGTGAAAGGGTTGGTGGTGAAGGCTTTTGATGGAGGAAGGTTGAGGAGGAAGGCTTCTACTTCTGGGTCTTTGGAGAGGGATATTGTTGTAAGGGATGTTTGA 2064 0.4976 MASKDPTLLKLHSARSDLKTLLQASSEAQHDIKETEKRFSLYHQSLSTASRRILPLQSLTMSRKALDARITRAVSPAVELLNTFKRTEGLQAKLVTFSAELSSEKSQQRRLEKLVEYVACVEEVKEGIENICEEVEMVVQRLQEVVEFVSRTKAADQDRDMRLKDALVTLKVLYEREVDEMRFEGLLDQALLHVQDEFEELLLRMKHRNMKDLLHQHGGEERELGSEMEVETLRRISTTLAANDCMDICIDIYLKARYRRAAKALMKLNPDYLRTYTPEGIDEMEWETLETAITLWIQHFEVAVKKVLFSEKKLCERVLGDFMEGLVWPECFIKISDKIMAVFFRFGEGVARSSKEPQKLFKLLDMFESLEKLKPHISQIFEGEPGADICTRFRELEKLIIDASSKVFWEFGLQIEGNIDGLPPPQDGSVPKLVRYAINYLKYLTAVNYKTSMIKVLRTQQTWRGKDGSSSIETSGKETLTDEGLLKHAISNVMEALQRNVESKRVCCRDKVLVHVFTMNTYWYIYMRTKNTQLSEVLGEKCMKEEYKAVAEECAYLYQKQAWGALVKVLDGEDVREEGKGSVGRVVSEKVDAFFKGLNEVCERHARGVYSIPDVDLKEQMREATVRLVVPAYAEFLECYSEFLNKKGYPSVERVKGLVVKAFDGGRLRRKASTSGSLERDIVVRDV* 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g1797 687 Gene3D Exocyst complex component Exo70 161 671 - -
Vra6g1797 687 PANTHER OS08G0519900 PROTEIN 5 665 - -
Vra6g1797 687 Pfam Exo70 exocyst complex subunit 296 646 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vra6g1797 687 Coils Coil 18 38 - -
Vra6g1797 687 PANTHER EXOCYST COMPLEX PROTEIN EXO70 5 665 IPR004140 GO:0000145|GO:0006887
Vra6g1797 687 SUPERFAMILY Cullin repeat-like 162 647 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g1797 Vra-Chr6 34409773 34412415 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g1797 5 651 EXO70 exocyst subunit family AT4G31540 28.722 3.11e-74 251
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1797 6 34409773 34412415 Vra6g1797 6 34409773 34412415 ECH