Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra6g0424 ATGATGATGTTCGAGGACATTGGGTTTTGTGGCGATTTGGATTTGTTGAGTTGTCCCCTTGGGGACGAGGATGTTGTTGCTGTGAGACACACAGATCCAGATCCTGTGGTTGAGGATGATTACAGTGATGAAGAAATTGATGTGGATGAGCTGGAGAAACGTATGTGGAGGGACAAAGTGCGGCACAAACGATTGAAAGAACAACAGAAGGCAAAGGAAGGGACAGATGCAGTGAAGCAAAGGCAATCCCAAGAGCAAGCTAGGAGGAAAAAGATGTCAAGAGCTCAGGATGGGATACTAAAGTACATGCTGAAGATGATGGAGGTCTGCAAAGCACAAGGGTTTGTTTATGGCATAATTCCTGAGAAAGGGAAGCCAGTGACTGGAGCATCAGACAATCTTCGCGAATGGTGGAAGGACAAGGTGAGGTTTGATCGGAATGGCCCTGCTGCAATAGCAAAGTATCAGGCTGATAATGCAATTCCAGGGAAGAATGATGGTTGCAATTCCATTGGTCCAACTCCACACACATTGCAGGAGTTACAGGACACAACACTGGGTTCTCTTCTGTCAGCACTTATGCAGCACTGTGATCCTCCTCAGAGAAGGTTCCCATTAGAGAAGGGTGTTCCTCCACCATGGTGGCCCACTGGGAATGAAGTATGGTGGCCTCAAATTGGTCTTCCCAAAGATCAAGGCCCTCCACCTTACAAGAAACCTCATGACCTCAAGAAGGCATGGAAGGTAGGTGTTCTTACTGCTGTCATCAAGCACATGTCTCCTGATATAGCCAAGATTCGGAAGCTCGTGAGACAGTCTAAATGCCTTCAGGACAAAATGACAGCAAAGGAGAGTGCAACATGGCTTGCCATCATCAACCAAGAGGAAGCCTTGGCTCGAGAGCTTTATCCTGATTATTGCCCCCCATTTTCCTCTGGTGCAGGTAATGGCTCCATGGTCATCAACGATTGCAGTGAGTATGATGTTGATGGGGCTGAGGAAGAACCAAACTTTGATGTGGAGGACCGGAAGCCAGATCCTCTTCATCCATCTAATCTTGGGATGGAGAGAATCACCGGAAGACTACCACTACAAATTTCTCATCCATTTAAGGGAGATGTTGTGACAAACCTTGATTTCATCCGGAAGAGGAAGATTCCTGGTGACTTCAACCTCATGATGGATCCCAAAATCTATACTTGTGAGCATCCTCAATGCCCTTACAATGAACCTCGCCTTGGTTTCCCTGACAGGTCGGCTAGGGACAATCATCAACTGAACTGTCCATACAGAAACAGTTCTTCAGATTATGGTGGTGGTTCCAACTTCCATGATTCTGAGGTTAAGCCAGTCATATTCCCTCAGTCTTTTGTTCAACCCAACACTACATCCCAGGCTGCAAATGTGGTTCAACCTTCATTTGCTGTATCTGGGCTTGGAGTTCCGGAAGATGGGCAAAAAATGATAAATGACCTCATGACAATATATGACACAAATATTATAGGAAACAATAACTTAAGTTCCAACAACTTTGTAGCCGCAGAAAATCAAAACTTTTCTCAGACCATGTTACAGCAACAGCAACAGGACAGTCGTCGTGACAATTATTTCACTGGCCAAGGAATGATGACAGAAGGAAATTTCTTTGCACGTGAGGAAGGACAATTTGAGAGGTTCAAAGCCATGAACATGAACGCCCCTTTTGACACCAACCACATGTTGTTTAGCCCCCAGTGTGATTTGTCGTCTTTTGATTTTAAGGATATACAAGGGGGAGGAATGGATACCGGTCACAGACAGCAGCAAGAGGTTTCAATTTGGTTCGAGTGA 1830 0.4552 MMMFEDIGFCGDLDLLSCPLGDEDVVAVRHTDPDPVVEDDYSDEEIDVDELEKRMWRDKVRHKRLKEQQKAKEGTDAVKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQADNAIPGKNDGCNSIGPTPHTLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVPPPWWPTGNEVWWPQIGLPKDQGPPPYKKPHDLKKAWKVGVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIINQEEALARELYPDYCPPFSSGAGNGSMVINDCSEYDVDGAEEEPNFDVEDRKPDPLHPSNLGMERITGRLPLQISHPFKGDVVTNLDFIRKRKIPGDFNLMMDPKIYTCEHPQCPYNEPRLGFPDRSARDNHQLNCPYRNSSSDYGGGSNFHDSEVKPVIFPQSFVQPNTTSQAANVVQPSFAVSGLGVPEDGQKMINDLMTIYDTNIIGNNNLSSNNFVAAENQNFSQTMLQQQQQDSRRDNYFTGQGMMTEGNFFAREEGQFERFKAMNMNAPFDTNHMLFSPQCDLSSFDFKDIQGGGMDTGHRQQQEVSIWFE* 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra6g0424 609 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 1 608 IPR006957 GO:0005634
Vra6g0424 609 MobiDBLite consensus disorder prediction 67 92 - -
Vra6g0424 609 PANTHER ETHYLENE INSENSITIVE 3-LIKE 1 PROTEIN 1 608 - -
Vra6g0424 609 Pfam Ethylene insensitive 3 49 296 IPR006957 GO:0005634
Vra6g0424 609 Gene3D - 81 158 IPR023278 GO:0003700|GO:0005634
Vra6g0424 609 SUPERFAMILY DNA-binding domain of EIN3-like 175 299 IPR023278 GO:0003700|GO:0005634
Vra6g0424 609 MobiDBLite consensus disorder prediction 61 92 - -
Vra6g0424 609 Gene3D - 173 306 IPR023278 GO:0003700|GO:0005634
Vra6g0424 609 Coils Coil 48 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra6g0424 Vra-Chr6 3445561 3449322 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra6g0424 2 608 EIL Transcription Factor Family AT3G20770 58.308 0.0 701
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Vra6g0424 EIN3 1.2e-129 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra10g0175 10 4824212 4827570 Vra6g0424 6 3445561 3449322 PCT