Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2813 ATGCCTCTTCCTCTCTCTCTCCGCTTTCTTCTTCGCTTTCCTCAGACCCCTTTGGGATTGGGCCCTCCTTGCTCCAACCGCACCCCCACATCGGTTCGAGTCCTTTGGGACCACCACCCCACCGCCCAACACGACCCTCCGCTTCATGACAGACACAAAGTTATGGCCTTTGTCGGCATTCAAACCGGGTTCGGATCCGTGGGCAGGCGCCAATCTCTCAGGAACACTTGGTTTCCTTCCGATCCACATGCACTTCAAGGCTTGGAAGAAGCCACTGGCTTGGCTTTTAGGTTTGTGATTGGTAGAACGAATGACAGATCGAAGATGTCTGCACTTCAGAAAGAAGTGGCACAATATGATGATTTCATTTTACTGGATATAGAAGAGGAGTATAGTAAGCTCCCATACAAAACGTTAGCTTTCTTCAAAGCTGCTTATGCACTTTTTGAGGCAGACTTTTATGTCAAAGCTGATGATGACATATACTTAAGGCCAGACCGTCTTTCATTACTGTTGGCAAAAGAGCGATCTCACCCTCAGACTTACATAGGATGCATGAAAAAAGGCCCTGTTTTCACTGATCCTAAACTAAAATGGTATGAGCCACTATCTAATTTACTTGGAAAGGAATATTTTCTTCATGCTTATGGTCCTATATATGCTCTCTCTGCCGATGTCGTATCAAGCTTGGTAGCGCTTAAGAATAACAGTTTCCGGATGTTCAGCAATGAGGATGTTACAATTGGAGCTTGGATGCTTGCAATGAATGTCAACCATGAGAATAGTCGTGAACTCTGTGCTCCAGAGTGTACCTCCACATCAATTGCTGTGTGGGATATTCCCAAGTGTTCAGGTCTCTGTAATCCAGAAAAGAGAATGTTGGAACTCCATCAGCAAGAAAGTTGTGCTAAGAGTCCAACTTTGGACTCTGATGAATAG 939 0.4526 MPLPLSLRFLLRFPQTPLGLGPPCSNRTPTSVRVLWDHHPTAQHDPPLHDRHKVMAFVGIQTGFGSVGRRQSLRNTWFPSDPHALQGLEEATGLAFRFVIGRTNDRSKMSALQKEVAQYDDFILLDIEEEYSKLPYKTLAFFKAAYALFEADFYVKADDDIYLRPDRLSLLLAKERSHPQTYIGCMKKGPVFTDPKLKWYEPLSNLLGKEYFLHAYGPIYALSADVVSSLVALKNNSFRMFSNEDVTIGAWMLAMNVNHENSRELCAPECTSTSIAVWDIPKCSGLCNPEKRMLELHQQESCAKSPTLDSDE* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2813 312 Pfam Galactosyltransferase 69 262 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vra5g2813 312 SUPERFAMILY Nucleotide-diphospho-sugar transferases 112 256 IPR029044 -
Vra5g2813 312 Gene3D - 47 298 - -
Vra5g2813 312 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 19 304 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vra5g2813 312 PANTHER HEXOSYLTRANSFERASE 19 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2813 Vra-Chr5 35716179 35721435 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g2813 25 312 Glycosyltransferase AT1G53290 77.163 8.41e-171 476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g2813 5 35716179 35721435 Vra5g2813 5 35716179 35721435 ECH
Vra5g2813 5 35716179 35721435 Vra2g1213 2 16865369 16872206 PCT