Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2368 ATGGAAGTAGTGTGGAGAAGTATTGTGATAGTGATGCTGATAATGGTTCTGATATGGGCATGGAGGATGCTGAATTGGTTATGGTTCACACCAAAGAGGCTTGAAAGGCTTCTAAGAGAGCAAGGTCTTCAAGGCAATCCATATACGCTTTTCTTTGGAGACACCAATGAATTTGTGAAGATGAGAAACGAAGCCTTCTCCAAACCCATGAATCTCTTCTCACACCACATAGTGCCCCGTGTGTTTACCTTTTTCCATCACAGTATCAACACACATGGAAAAAATTCTTTTATTTGGTTTGGACCGGCACCAAGGGTGACCCTCACTGATCCTGAGCTAATCAAAGATGTATTGAACAAGTCTAATGACTTCGAAAAGATTAATATGAATCCACAATTCAGGTTACTAGCTCCTGGCCTTGTAAGACTCGAGGGAGAAAAGTGGAGCAAGCACAGAAAGATAATCAATCCTGCTTTTAACTTAGAGAAGTTGAAGGATATGTTACCACTATTCATCAAATGTTGTGATGATCTGATTAGCAAATGGGAAGAAATGTTGTCTTTCAATGGATCAAGTGAAATAGACATATGGCCTTTCCTTCAGACTTTGGCTAGTGACGCAATTTCTCGAACAGCATTTGGAAGTAGTTATGAAGAAGGACGAAGAATATTTCAACTTCTAAAAGAGCAAACTCAGCTAACAGTGCAAATTATGTTGAAAGTTTACATCCCTGGATGGAGGTTTGTACCCACTGCTACCCATAGAAGGATGAAAGCAATTGACAGGGAAATAAAAGCTTCACTTATGGATATCATTAATAACAGAGAGAAAGCATTAAAGGAGGGTGAAGCCACTAAACATGACTTGTTAGATATACTTCTGGAGTCAAATCACAAGGAAATCCAAGAACATGGAAACAATAAAAATGTTGGAATGAATATTGAAGATGTTATTGCGGAATGCAAATTATTTTACTTTGCAGGGCAGGAGACCACTTCATCTTTGCTTGTTTGGACAATGATATTATTGAGTATGTACCCTGATTGGCAAACACGTGCAAGGGAGGAAGTCTTACAAGTTTTTGGCAATCAAGATCCAGATTTTGATGGACTGAATCACCTTAAGATTGTTACCATGATTTTGAATGAGGTTCTCAGGCTATACTCACCAGTAATTGGTCTTGCTCGGAAAGTTCGTAAAGATGTGAAACTTGGAAATCTATCATTAGTCGCAGGAATGCAACTTTCTATACCAACAATTTTGGTTCATCATGATTGTGAGCTCTGGGGTTATGATGCTAAAGAGTTCAAACCTGAGAGATTTGCTGAAGGAGTTCTAAAGGCCACAAATGGCAGAGCTTCACTAATTCCCTTTGGAGGTGGTCCTAGGATTTGCATTGGACAGAACTTCTCCTTGCTGGAAGCAAAGATTGCTTTGTCAATGATTTTACAACGTTTCTCGTTTGAACTCTCTTCGACCTATACTCATGCTCCAACTACTGTGATTACTCTTCAACCCCAATATGGTGCTCATCTCATTCTTCGTAAAGTGGAAATATAA 1560 0.3917 MEVVWRSIVIVMLIMVLIWAWRMLNWLWFTPKRLERLLREQGLQGNPYTLFFGDTNEFVKMRNEAFSKPMNLFSHHIVPRVFTFFHHSINTHGKNSFIWFGPAPRVTLTDPELIKDVLNKSNDFEKINMNPQFRLLAPGLVRLEGEKWSKHRKIINPAFNLEKLKDMLPLFIKCCDDLISKWEEMLSFNGSSEIDIWPFLQTLASDAISRTAFGSSYEEGRRIFQLLKEQTQLTVQIMLKVYIPGWRFVPTATHRRMKAIDREIKASLMDIINNREKALKEGEATKHDLLDILLESNHKEIQEHGNNKNVGMNIEDVIAECKLFYFAGQETTSSLLVWTMILLSMYPDWQTRAREEVLQVFGNQDPDFDGLNHLKIVTMILNEVLRLYSPVIGLARKVRKDVKLGNLSLVAGMQLSIPTILVHHDCELWGYDAKEFKPERFAEGVLKATNGRASLIPFGGGPRICIGQNFSLLEAKIALSMILQRFSFELSSTYTHAPTTVITLQPQYGAHLILRKVEI* 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2368 519 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Vra5g2368 519 SUPERFAMILY Cytochrome P450 76 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2368 519 PANTHER CYTOCHROME 10 513 - -
Vra5g2368 519 PANTHER CYTOCHROME P450 FAMILY MEMBER 10 513 - -
Vra5g2368 519 Pfam Cytochrome P450 82 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2368 519 Gene3D Cytochrome P450 27 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2368 519 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2368 519 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2368 519 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2368 519 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2368 519 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2368 519 PRINTS E-class P450 group I signature 203 221 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2368 519 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2368 519 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2368 519 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vra5g2368 519 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2368 Vra-Chr5 30694391 30728916 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g2368 19 517 Cytochrome P450 AT3G14610 56.687 0.0 583
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g2368 5 30694391 30728916 Vra5g2368 5 30694391 30728916 ECH