Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2316 ATGGCTCCAAGATTCAACTCCTCAAAGTCGCTGTATGATTTTGTGGTGAGAGCTGGCAATGGTGTGAAAGGTTTGGTAGACTCAGGTGTGTCCGAGGTGCCAGAGAGGTACATACAACCTCGAGGGGAACGGATCAACAAGCATGATTCAAGAGCATGTGATGCTCCACCCATTGACTTGTCAAAACTCAATGGAGAAGAGCATGAGAAAGTGGTGGATGAGATTGCTAGAGCAGCTGAAACTCTTGGTTTCTTTCAGGTGGTGAATCATGGGGTGCCTTTGGAGTTGCTGGAATCGCTTAAAGATGCAGCACACACATTCTTCAGTTTGCCACCAGAAAAGAAAGCTGTTTATTGCACTGGGGTTAGCCCAAGCCCTAGGGTAAAATATGGGACTAGCTTTGTGCCAGAGAAAGAGAAGGCTTTGGAATGGAAAGACTACATCAGTATGACATTTAACAGTGATGAAGAAGCTCTTCAGTGTTGGCCTAATGAGTGCAAGGAAGTTGCACTTGAGTATTTGAAGTTATCAACTAAGATGGTTAGAGACATTGTGGAAGCGTTGATTAGTAAGCTGGGAGTTACACTAAAAGATTCAGAAATTGAGGGCCTTCTTGGAATGAAGATGGTTAACATGAACTACTATCCAGCGTGCCCAAATCCAGAGCTTACAGTGGGTGTTGGGCGCCACTCCGATGTGGGAGCTATCACAGTACTGCTCCAAGATGGCATCGGAGGCTTGTATGTCAAGGTAGACCAACAAAATCGTGCTGACAAAGGAGAGTGGTTGGAAATTCCCCCAATCCCTGGAGCTCTTGTAATTAATATTGGCGATACTTTACAGATACTGAGCAATGGGAAGTATAAGAGTGCTGAACACCGAGTAAGGACAAGTAGCAGCGAATCCAGGGTATCGGTTCCGGTGTTTACAATGCCAATAGCTACAGAAAGAATAGGTCCATTGCCAGAGGTGGTGGAGAAAGATGGGTTGGCCCGCTACAGAGAAGTTGTGCTCCAGGACTACATGAACAATTTCTTTGGGAATGCTCATGCTGGAAAAAGCTCTCTTGATTTTGCAAGGATCAACTAG 1089 0.4545 MAPRFNSSKSLYDFVVRAGNGVKGLVDSGVSEVPERYIQPRGERINKHDSRACDAPPIDLSKLNGEEHEKVVDEIARAAETLGFFQVVNHGVPLELLESLKDAAHTFFSLPPEKKAVYCTGVSPSPRVKYGTSFVPEKEKALEWKDYISMTFNSDEEALQCWPNECKEVALEYLKLSTKMVRDIVEALISKLGVTLKDSEIEGLLGMKMVNMNYYPACPNPELTVGVGRHSDVGAITVLLQDGIGGLYVKVDQQNRADKGEWLEIPPIPGALVINIGDTLQILSNGKYKSAEHRVRTSSSESRVSVPVFTMPIATERIGPLPEVVEKDGLARYREVVLQDYMNNFFGNAHAGKSSLDFARIN* 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2316 362 Pfam non-haem dioxygenase in morphine synthesis N-terminal 56 162 IPR026992 -
Vra5g2316 362 Pfam 2OG-Fe(II) oxygenase superfamily 209 311 IPR044861 -
Vra5g2316 362 PANTHER SCOPOLETIN 8-HYDROXYLASE 4 352 - -
Vra5g2316 362 SUPERFAMILY Clavaminate synthase-like 21 350 - -
Vra5g2316 362 PANTHER OXIDOREDUCTASE, 2OG-FE II OXYGENASE FAMILY PROTEIN 4 352 - -
Vra5g2316 362 Gene3D - 11 343 IPR027443 -
Vra5g2316 362 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 200 312 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2316 Vra-Chr5 29859616 29860910 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g2316 21 361 Glycosyltransferase AT5G59530 34.091 5.49e-61 198
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g2316 5 29859616 29860910 Vra5g2316 5 29859616 29860910 ECH