Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2241 ATGAGGCTCCACTACTTCACCCTTTTCCTTCTCTTGCTCCCTTTGAAGTTGAGCAGCATTTATGGCATCTCTCCACAAGCAACTGCACCCAATAAATCATTCAAGTCCTTACCCCCTGAGGCTTTTCTCTCCATTGATCACTATCACACAACATGTCCTCATGCTGAAGGCATCATCTCACAGAAGGTTGCTGCTTGGGTTAAGCAGGACCCCACTTTGGCCCCAGCCATCATACGCCTTCATTTCCATGACTGTGCTGTTAGAGGATGTGATGGATCAATTTTGCTCAACCATCTAGGGAGTGAGAGGACTGCTTTGGAGAGCAAAACCCTAAGAGGTTTCCAATTGATTGATGATATCAAGGCTGAGTTGGAGAGGAAGTGTCCAAAAACAGTCTCTTGTGCTGATATTCTCACTGCTGCTGCAAGAGATGCCACTCTTTTGGTTGGAGGACCATTCTGGGAAGTCCCATTTGGCCGCAAAGATGGCAAGATTTCTTTATCAACAGAAGCCAATTTGGTTCCCCATGGCCATGAAAACATCACAGCTCTTATTGCATTCTTCCAAGAAAAAGGGTTAGACATTCTTGACTTGGTCACACTCTCAGGTTCACACACAATTGGGAGGAGCACTTGCTCTTCTGTTATGGACAGGATTTACAATTTCAATGGGACTCAAAAGCCTGACCCCTCACTCAATGTGTATTTCTTGAAGTTGTTGAGGAAGAGGTGTAAATCAGAGTTGGATTTGGTGCACCTTGATGTTATAACCCCAAGAACTTTTGACACAATCTATTATACAAACCTTATGAGGAAGGTGGGGTTGTTGTCAACAGATCAGTCTCTCTTTTCAGATGCAAGGACAGCTCCTTTTGTTGAAGCATTTGCAACACAACCTTTCCTTTTCACCAGCCAGTTTTCAGTGTCAATGGTGAAACTTGGGAATGTTCAAGTTTTGACTAGGCCTAATGAAGGTCAACCATGGTGCACCCGACAAAGGTGGTGA 1005 0.4448 MRLHYFTLFLLLLPLKLSSIYGISPQATAPNKSFKSLPPEAFLSIDHYHTTCPHAEGIISQKVAAWVKQDPTLAPAIIRLHFHDCAVRGCDGSILLNHLGSERTALESKTLRGFQLIDDIKAELERKCPKTVSCADILTAAARDATLLVGGPFWEVPFGRKDGKISLSTEANLVPHGHENITALIAFFQEKGLDILDLVTLSGSHTIGRSTCSSVMDRIYNFNGTQKPDPSLNVYFLKLLRKRCKSELDLVHLDVITPRTFDTIYYTNLMRKVGLLSTDQSLFSDARTAPFVEAFATQPFLFTSQFSVSMVKLGNVQVLTRPNEGQPWCTRQRW* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2241 334 Pfam Peroxidase 60 297 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra5g2241 334 PRINTS Plant peroxidase signature 52 71 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra5g2241 334 PRINTS Plant peroxidase signature 76 96 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra5g2241 334 PRINTS Plant peroxidase signature 112 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra5g2241 334 PRINTS Plant peroxidase signature 131 141 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra5g2241 334 PRINTS Plant peroxidase signature 150 165 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra5g2241 334 PRINTS Plant peroxidase signature 196 208 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra5g2241 334 PRINTS Plant peroxidase signature 252 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra5g2241 334 PRINTS Plant peroxidase signature 268 285 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra5g2241 334 PRINTS Plant peroxidase signature 308 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra5g2241 334 Gene3D - 46 321 - -
Vra5g2241 334 PRINTS Haem peroxidase superfamily signature 74 88 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra5g2241 334 PRINTS Haem peroxidase superfamily signature 132 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra5g2241 334 PRINTS Haem peroxidase superfamily signature 150 162 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra5g2241 334 PRINTS Haem peroxidase superfamily signature 197 212 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra5g2241 334 PRINTS Haem peroxidase superfamily signature 254 269 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra5g2241 334 ProSitePatterns Peroxidases proximal heme-ligand signature. 197 207 IPR019793 -
Vra5g2241 334 ProSiteProfiles Plant heme peroxidase family profile. 42 334 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vra5g2241 334 Gene3D Peroxidase, domain 2 175 313 - -
Vra5g2241 334 PANTHER PEROXIDASE 25-RELATED 31 325 IPR000823 GO:0004601|GO:0006979|GO:0020037
Vra5g2241 334 SUPERFAMILY Heme-dependent peroxidases 43 330 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vra5g2241 334 PANTHER PEROXIDASE 31 325 - -
Vra5g2241 334 ProSitePatterns Peroxidases active site signature. 74 85 IPR019794 GO:0004601
Vra5g2241 334 CDD secretory_peroxidase 43 326 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g2241 Vra-Chr5 28519731 28522380 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g2241 5 28519731 28522380 Vra5g2241 5 28519731 28522380 ECH