Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g2031 ATGGACGAGAATGGTAGCTCAAGTAATGAACCAAAGAACAACAACAGAAACCTGCCTGTCTCAGTTTTCTTCAAAGATGCAAGACATGTTTTCAAGATGGACTCCATTGCCAAGGAGATACTTGGGATTGCATTCCCTTCTGCACTTGCTGTTGCTGCTGATCCTATTGCTTCTCTCATAGACACAGCATTCATTGGCCACTTGGGTCCCGTGGAGCTTGCTGCAGCAGGAGTGTCCATCGCTTTGTTTAACCAAGCTTCAAGAATTACCATCTTCCCTTTGGTTAGCATCACAACTTCCTTTGTGGCTGAGGAAAATACCATCGAAAAAATCAACAAAGAAAAGAATTTGACTGAAAACATTAAGGCCAAGTCCAAGGAGGTAAGGCCGGAGGATCAGTTGATTCAAGATATAGAGAAAGGAGCATCCAAGGAACACAATGAGACTCCAACAGAATCTTCATCTTCAACAAGTGAGAATGTGGAAATGGATGACTGCAATACTAGTGTAAGCAAATCTACCTCTGCTGGAAGTAGTAGTAACAAGAGTGTGTCAAAACCTGGAAGGAAGAAGCGACACGTTGCTTCTGCATCAACAGCGCTACTTTTTGGCACAATCCTTGGCCTTCTTCAAGCAGCAACCCTTGTATTTGCAGCCAAACCTCTATTAGCTGCAATGGGTCTGAAACCTGATTCTCCTATGCTAAATCCAGCTGTTAAATACTTGAGATTGAGAGCTTTAGGTGCTCCTGCAGTTCTTCTCTCCTTGGCCATGCAAGGAATCTTTCGAGGATTCAAGGACACTACAACTCCTTTATATGTTATTGTCTCGGGGTATGCATTGAATGTGGCTTTGGATCCAATTCTTATCTTCTACTGCAAACTGGGCATCAAAGGTGCAGCCATTTCACATGTGCTCTCTCAGTATGTGATGGCATTCGCCCTCTTGTTGATATTAACTAGAAAAGTGGATCTTGTACCTCCAAGCATCAAGGACTTGCAGATATTCAGGTTTCTTAAAAATGGAGGTCTTCTGTTGGCAAGAGTTGTGGCTGTGACATTCTGCCAAACCCTTGCAGCGTCATTGGCAGCAAGATTTGGCCCAATTCCTATGGCTGCTTTCCAAACCTGCTTGCAGGTGTGGCTGACATCTTCCCTTCTTGCTGATGGTTTAGCTGTTGCTGTACAGGCAATTCTAGCTTGTTCCTTTGCTGAGAAAGATTATGAAAAGGTGATTGCTGCTGCAACAAGAACGCTTCAGATGAGTTTTGTTTTAGGAGTTGGACTTTCTCTTGCAGTTGGAGTTGGTTTATACTTTGGAGCTGGAATCTTCTCCAAAAGTGTTCTTGTTGTGCACTTAATCAGAATAGGACTCCCGTTTGTAGCTGCAACACAACCAATCAACTCATTAGCCTTTGTGTTTGATGGTGTGAACTATGGAGCTTCTGATTTTGCATATTCTGCATACTCATTGGTAACTGTGTCATTAGCAAGTGTTGCTTCACTGTTCCTTCTCTCTAAGAGCAAAGGTTTTGTTGGACTATGGATTGCACTAACCATATATATGAGTCTTCGCATGTTTGCTGGTGTATGGAGGATGGGAACAGGAACAGGACCATGGCGTTTTCTGAGAGGACGACGTTGA 1644 0.4337 MDENGSSSNEPKNNNRNLPVSVFFKDARHVFKMDSIAKEILGIAFPSALAVAADPIASLIDTAFIGHLGPVELAAAGVSIALFNQASRITIFPLVSITTSFVAEENTIEKINKEKNLTENIKAKSKEVRPEDQLIQDIEKGASKEHNETPTESSSSTSENVEMDDCNTSVSKSTSAGSSSNKSVSKPGRKKRHVASASTALLFGTILGLLQAATLVFAAKPLLAAMGLKPDSPMLNPAVKYLRLRALGAPAVLLSLAMQGIFRGFKDTTTPLYVIVSGYALNVALDPILIFYCKLGIKGAAISHVLSQYVMAFALLLILTRKVDLVPPSIKDLQIFRFLKNGGLLLARVVAVTFCQTLAASLAARFGPIPMAAFQTCLQVWLTSSLLADGLAVAVQAILACSFAEKDYEKVIAAATRTLQMSFVLGVGLSLAVGVGLYFGAGIFSKSVLVVHLIRIGLPFVAATQPINSLAFVFDGVNYGASDFAYSAYSLVTVSLASVASLFLLSKSKGFVGLWIALTIYMSLRMFAGVWRMGTGTGPWRFLRGRR* 548
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vra5g2031 547 MobiDBLite consensus disorder prediction 139 191 - -
Vra5g2031 547 PANTHER PROTEIN DETOXIFICATION 13 545 - -
Vra5g2031 547 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 13 545 IPR044644 -
Vra5g2031 547 Pfam MatE 349 496 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vra5g2031 547 Pfam MatE 189 288 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vra5g2031 547 TIGRFAM matE: MATE efflux family protein 46 515 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vra5g2031 547 MobiDBLite consensus disorder prediction 148 184 - -
Vra5g2031 547 CDD MATE_DinF_like 38 535 IPR044644 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Vra5g2031 Vra-Chr5 25908646 25916563 Dispersed/Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g1682 2 25043674 25049552 Vra5g2031 5 25908646 25916563 PCT