Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1669 ATGGAGTTGTGGAATGTGGTGTTTGTGTGGTGTGTTTTGCGTTTGGGTTTTCTTCATCACACTGAAGCCATTGTTAAGCTACGAGGAAATGAAACAATCCCAGCACTGATTTTATTTGGAGATTCGATCGTAGACACAGGGGCTAACAACAACTTAATCACCGCGTTTAAGAGCAATTTTCCTCCTTATGGAAGGGATTTTCATGCTGCTCAACCAACAGGAAGATTCAGCAATGGCAAGGTTCCTTCTGATTTCGTTGCTGAAGAATTGGGAATCAACGAATATTCAGTTACATACACCAGTCCAAATTTGCAGCCTGATGATCTGTTGAAGGGAATCAACTTCGCTTCGGGTGGCGCAGGATATGATCCTTTCACCGCACAACTTGCCTCAGTAGTACCGTTATCTGAGCAACTGGAGCAGTTCAAAGAATATATAGGAAAGCTTAAAGCAAATTTTGGAGAAGCGAAAACGAACTTCATCTTGTCCAAAAGTTTAGTTCTTGTGGTATCAAGCAGCAACGACATTGCCAATACCTATTTTGCATCTGGAATTAGAAAACTGGATTACGACGTTCCCAGTTACACAGATGTGTTAGTGCAACTCGCCTCTTCCTTTGTTAAGGAATTGTACGGTTTGGGGGTAAGGAGAATGGGAGTGTTTGGTGCACCTCCTCTGGGATGCTTGCCTTTCATGCGAACAATGTTTGGAGGTTTAGAAAGAAAGTGCAGAGAGGAAATAAACATGGCATCGAAACTGTTCAATTCTAAAATCTCTTCAGAGCTTCACAAGTTACATCAAAACTGGCCTCAAGCGAAGATTGTGTATATCAATATTTACGATCCTTTGCTCAATATCATCCAAAATCCAATGAAATATGGATTAGAAGTTGTTGACAGGGGATGCTGTGGCACAGGGTCTGTAGAGGCAGGAATTCTGTGTAACCCATTGGATCTGCAAACCTGCACAGATGATTCTAAATATGTGTTTTGGGACAGTTACCATCCCACGCAGAGGACGTATCAGATTCTTGTTGGTGAAATCCTCAACAAATATGTAAACAATTTCTCTTGA 1074 0.4162 MELWNVVFVWCVLRLGFLHHTEAIVKLRGNETIPALILFGDSIVDTGANNNLITAFKSNFPPYGRDFHAAQPTGRFSNGKVPSDFVAEELGINEYSVTYTSPNLQPDDLLKGINFASGGAGYDPFTAQLASVVPLSEQLEQFKEYIGKLKANFGEAKTNFILSKSLVLVVSSSNDIANTYFASGIRKLDYDVPSYTDVLVQLASSFVKELYGLGVRRMGVFGAPPLGCLPFMRTMFGGLERKCREEINMASKLFNSKISSELHKLHQNWPQAKIVYINIYDPLLNIIQNPMKYGLEVVDRGCCGTGSVEAGILCNPLDLQTCTDDSKYVFWDSYHPTQRTYQILVGEILNKYVNNFS* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1669 357 SUPERFAMILY SGNH hydrolase 35 352 - -
Vra5g1669 357 Gene3D SGNH hydrolase 21 354 IPR036514 -
Vra5g1669 357 Pfam GDSL-like Lipase/Acylhydrolase 37 344 IPR001087 GO:0016788
Vra5g1669 357 PANTHER GDSL ESTERASE/LIPASE EXL3 1 353 - -
Vra5g1669 357 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 1 353 - -
Vra5g1669 357 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 36 47 IPR008265 GO:0006629|GO:0016298
Vra5g1669 357 CDD SGNH_plant_lipase_like 34 352 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1669 Vra-Chr5 23067270 23068893 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g2014 6 36759739 36761199 Vra5g1669 5 23067270 23068893 PCT
Vra5g1669 5 23067270 23068893 Vra6g2017 6 36775092 36778393 PCT