Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1668 ATGGCTGTGTTTACGAAGTTCTTGAACTGTCGTACAACCAGCTTGATACTCCGTTTGATGTTACTGTTACTTTTGCCGTTGAGAACGAAGGGCTTGGTGAAACTGCCACCAAATATTTCAATTCCCGCAGTAATAGGTTTCGGAGATTCGATCATTGACCCCGGCAACAACAACAAGGTTAAAACGCTGGTGAAGTGTAACTTCCCTCCTTACGGTAAAGACTTCGACGGAGGAATTCCAACCGGTCGATTTTGCAACGGAAAAATTCCATCGGATTTGCTAGTTGAAGAACTGGGTATCAAGAAGCTTTTACCAGCTTATTTGGATCCAAATCTCAAGCCAGACGACCTTCTCACCGGAGTGTGCTTTGCTTCCGGTGCTTCCGGATACGATCCTTTAACGCCAAAAATAGCGTCGGTGATATCAATGTCCGAACAACTAGAAATGTTCAAGGAATACGTAGAGAAGCTGAAACAAATTGTTGGAGTGGATAGAACCAACTTCATCTTAGCAAACAGTTTTTTCCTTGTGGTAGCTGGAAGTGATGACATTGCAAACACGTATTTTGTCGCTCGCGCTCGTCAATTACAGTATGATATTCCTGCTTACACAGATCTCATGTGCAATTCCGCTTCTGATTTCGTGAAGGAATTATATGGACTCGGAGCACGAAGAATCGGAGTATTAAGTGCACCACCGATCGGTTGCGTTCCGTCGCAAAGAACACTTGCCGGAGGCTTAGAAAGAGAGTGCGCAGGGGACTACAATTACGCGGCCAAGTTATTTAACTCTAAACTCTCAAGCAAGCTTGATTCTCTGAGTGACTTGGCCGATAGTAGGATCGTTTACATTGACGTTTACAACCCCCTAATGGATATCATTGTGAACTACAAAAGCTATGGCTACGAAGTTATGGACAAAGGCTGCTGTGGCACAGGGAAATTGGAGGTTGCTGTTCTCTGCAACCGTTTGGATGCAACTTGTTCCGATGCTTCCAAATACGTGTTTTGGGATAGTTATCATCCTACTGAAAAAGTATACAAACAGCTCGTAGCCCAGATCCTTCAAAACTATTTAAGTCGCTTCTTCTGA 1092 0.4396 MAVFTKFLNCRTTSLILRLMLLLLLPLRTKGLVKLPPNISIPAVIGFGDSIIDPGNNNKVKTLVKCNFPPYGKDFDGGIPTGRFCNGKIPSDLLVEELGIKKLLPAYLDPNLKPDDLLTGVCFASGASGYDPLTPKIASVISMSEQLEMFKEYVEKLKQIVGVDRTNFILANSFFLVVAGSDDIANTYFVARARQLQYDIPAYTDLMCNSASDFVKELYGLGARRIGVLSAPPIGCVPSQRTLAGGLERECAGDYNYAAKLFNSKLSSKLDSLSDLADSRIVYIDVYNPLMDIIVNYKSYGYEVMDKGCCGTGKLEVAVLCNRLDATCSDASKYVFWDSYHPTEKVYKQLVAQILQNYLSRFF* 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1668 363 CDD SGNH_plant_lipase_like 42 358 IPR035669 -
Vra5g1668 363 Gene3D SGNH hydrolase 37 360 IPR036514 -
Vra5g1668 363 Pfam GDSL-like Lipase/Acylhydrolase 46 351 IPR001087 GO:0016788
Vra5g1668 363 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 11 362 - -
Vra5g1668 363 PANTHER GDSL ESTERASE/LIPASE EXL3 11 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1668 Vra-Chr5 23054463 23058077 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1668 5 23054463 23058077 Vra5g1668 5 23054463 23058077 ECH
Vra6g2016 6 36771579 36773580 Vra5g1668 5 23054463 23058077 PCT
Vra5g1668 5 23054463 23058077 Vra6g2018 6 36780986 36783617 PCT