Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1667 ATGGATTCTTCTTTAATTCCTTCTTCACTTCTGCTCCGTCTCCTGTTACTGTTACTGTTCTTCATCATCCTCTTTTGCAAAACCAAAGGTTCATCGCAACTTCCACCAAATTTTAAGGTTCCTGCAGTCTTGGTGTTCGGAGATTCGATAATGGACACCGGCAACAACAACAATAACACGCAAACGCTTGCAAAGTGCAATTTCCCTCCCTATGGTAGAGACTTCCAAGGAGCCATTCCGACCGGTCGATTCGGTAACGGAAAAGTTCCTTCCGATCTTATAGCTGAAGAACTAGGAATTAAGGATCTTCTACCGGCATATTTCGATCCAAATCTCCAACCTAATGATCTCCTCACCGGTGTCTGTTTTGCATCTGGTGGTTCAGGCTACGATCCTCTCACAGCTAAAATGGCGACAGCTATATCATTGTCTGGTCAAATAGACATGTTCAAAGACTACATAAGAAAGCTTGAAGGACTTGTCGGGGAGGACCGAACCAACTTCATCCTAGCCAATAGCATTGTCCTTGTGGTGGAAGGCAGCAACGACATTTCCAACACTTACTTTCTGAGTCATGCTAGAGAAGTGCAATATGATATTCCTACTTACACTGACCTAATGGTTAGCTCAGCTTCTAGTTTCTTAAAGGAAATATATCAACTAGGTGCTCGGAGGATAGGAGTATTCAGTGCCCCACCGATTGGGTGTGTGCCATTTCAGAGAACAATTTTGGGAGGATTGCTTAGAAAATGTGCAGAAAAGTATAACGACGCGGCCAAGTTATTCAACGGCAAACTGGCAAAGGAGTTGGCTTCTCTTAACCAGAATTTGCCTAATGCCACGGTGGTTTACCTTGATGTTTACAACCCTCTACTTGATATCATTGTAAATTACCAAAATTATGGTTTTAAAGTGGGAGACAGAGGATGTTGTGGTACGGGCAAAATAGAGACTGCAGTGTTCTGCAACTCTTTGGACCCCACGTGTCAGAATGCGGGAGATTACGTTTTTTGGGATGGTTTTCATCCTTCTGAAAGTGTTTACAGAAAGCTCGTACCTCCTCTTCTCAAAAAATATTTGTACCAGTTCATCTGA 1095 0.4301 MDSSLIPSSLLLRLLLLLLFFIILFCKTKGSSQLPPNFKVPAVLVFGDSIMDTGNNNNNTQTLAKCNFPPYGRDFQGAIPTGRFGNGKVPSDLIAEELGIKDLLPAYFDPNLQPNDLLTGVCFASGGSGYDPLTAKMATAISLSGQIDMFKDYIRKLEGLVGEDRTNFILANSIVLVVEGSNDISNTYFLSHAREVQYDIPTYTDLMVSSASSFLKEIYQLGARRIGVFSAPPIGCVPFQRTILGGLLRKCAEKYNDAAKLFNGKLAKELASLNQNLPNATVVYLDVYNPLLDIIVNYQNYGFKVGDRGCCGTGKIETAVFCNSLDPTCQNAGDYVFWDGFHPSESVYRKLVPPLLKKYLYQFI* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1667 364 CDD SGNH_plant_lipase_like 41 349 IPR035669 -
Vra5g1667 364 Gene3D SGNH hydrolase 32 357 IPR036514 -
Vra5g1667 364 PANTHER GDSL ESTERASE/LIPASE EXL3 19 362 - -
Vra5g1667 364 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 19 362 - -
Vra5g1667 364 SUPERFAMILY SGNH hydrolase 42 358 - -
Vra5g1667 364 Pfam GDSL-like Lipase/Acylhydrolase 43 351 IPR001087 GO:0016788
Vra5g1667 364 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 43 54 IPR008265 GO:0006629|GO:0016298
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1667 Vra-Chr5 23041794 23047090 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1667 5 23041794 23047090 Vra5g1667 5 23041794 23047090 ECH
Vra6g2017 6 36775092 36778393 Vra5g1667 5 23041794 23047090 PCT
Vra5g1667 5 23041794 23047090 Vra6g2019 6 36796921 36800868 PCT