Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1644 ATGGAAGGGCAACAGCAACAATCAGGCAGCAAGTCTAGGTTCAGACGCATCTGTGTTTACTGCGGTAGCAGCCCTGGCAAAAGCCCCAGCTACCAGCTCGCTGCTGTTCAACTCGGAAAACAATTGGTGGAGAGGAAGATTGACTTGGTGTATGGAGGAGGAAGCATAGGCTTGATGGGTCTAATCTCACAAGTTGTATACGATGGTGGACGCCACGTGTTAGGGGTCATTCCAAACACGCTTAATGCAAGAGAGATCACCGGCGAGAGTGTAGGAGAAGTCAGAGCTGTATCCGGCATGCACCAACGCAAAGCAGAGATGGCCCGACAGGCCGATGCATTCATTGCACTGCCAGGTGGATATGGCACCCTTGAAGAACTACTGGAAATTATCACCTGGGCTCAGTTAGGTATCCATGATAAACCGGTGGGGTTGTTGAACGTGGATGGGTACTACAACTCGCTGCTGGCATTCATGGACAAAGCTGTGGACGAAGGTTTCGTAACACCTGCTGCCCGTCACATTATTGTTTCTGCCCAAACTGCCCAAGACCTCATGTGCAAACTTGAGGAATATGTCCCCGAGCACTGTGGCGTGGCCCCCAAGCTAAGTTGGGAGATGGAGCAACAGTTAGTTAACACTGCAAAGTCAGATATTTCCCGTTGA 666 0.5075 MEGQQQQSGSKSRFRRICVYCGSSPGKSPSYQLAAVQLGKQLVERKIDLVYGGGSIGLMGLISQVVYDGGRHVLGVIPNTLNAREITGESVGEVRAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEIITWAQLGIHDKPVGLLNVDGYYNSLLAFMDKAVDEGFVTPAARHIIVSAQTAQDLMCKLEEYVPEHCGVAPKLSWEMEQQLVNTAKSDISR* 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1644 221 PANTHER LOG FAMILY PROTEIN YJL055W 7 217 - -
Vra5g1644 221 TIGRFAM TIGR00730: TIGR00730 family protein 16 192 IPR005269 GO:0009691|GO:0016787
Vra5g1644 221 Pfam Possible lysine decarboxylase 59 188 IPR031100 -
Vra5g1644 221 Gene3D - 3 191 - -
Vra5g1644 221 SUPERFAMILY MCP/YpsA-like 13 192 - -
Vra5g1644 221 PANTHER CYTOKININ RIBOSIDE 5'-MONOPHOSPHATE PHOSPHORIBOHYDROLASE 7 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1644 Vra-Chr5 22867679 22870029 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1644 5 22867679 22870029 Vra5g1644 5 22867679 22870029 ECH
Vra6g2044 6 36984863 36987109 Vra5g1644 5 22867679 22870029 PCT