Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1642 ATGGATCGACGCTGGCCTTGGAAGAAAAAATCATCGGAGAAGGCTGTGATTGAGAAAGCAGCTACTGCATTGGATTCCTCCGATGCTTCCCAGAACCAGGATAACAAGAAACCAAACTACGTCCAAATCTCTGTGGAATCCTACACACATCTGTCTAGCTTGGACGATCAAGTGAAGACATACGAGGAAAAAGTTCAGGCACTGGAGGATGAGGTCAAGGAAATTAATGAAAAGCTGTCCGCAGCAAACTCCGAGATAAATACCAAGGAAAGCATGGTAAAACAACATGCTAAAGTTGCTGAAGAAGCTGTATCAGGCTGGGAAAAGGCTGAATCTGAGGCTTTGGCATTGAAGAATCATCTAGAATCTGTCACTCTTTTGAAACTCACTGCTGAGGATCGTGCAACACATTTAGATGGTGCTCTTAAAGAGTGTATGCGACAAATCCGAAACCTTAAGGAAGAACATGATCTGAAAATACAGGAAGTTGCTCTCTCAAAAACCAAGCAGTTAGACAAGATTAAGGGGGAGCTCGAGGCAAAGATAGCGAATTTTGAACAGGAACTTCTTAGGTCTGCAGCTGAAAATGGGGCCCTGTCAAGGTCATTGCAGGAGCGCTCTAACATGCTAATCAAATTAAGTGAAGATAAGGCTCGCGCTGAGGCTGAAATTGAGCTTCTTAAGGGCAACATAGAAGCATGTGAAAGGGAAAATAATTCACTTAAATATGAACTACATGTTGTTTCCAAAGAGCTTGAAATTCGCAATGAAGAAAAAAACATGAGTCTGAGGTCTGCCGAAGCTGCTAACAAGCAGCACATGGAGGGTGTAAAAAAAATTGCTAAGTTAGAGGCTGAGTGCCAAAGATTACGTGGTCTCGTGAGGAAAAAGTTACCTGGTCCTGCTGCACTTGCACAGATGAAGCTAGAGGTTGAAAGCCTGGGCCGAGATTTTGGAGAAAGTCGATTAAGGAAGTCCCCTGTGAAGCCTGCTTCCCCTAATTTGTCTCCATTACCCGATTTCTCTCTGGAGAATGTGCAGAAATTCCAGAAGGATAATGAATTTCTTACAGAGCGTTTATTGGCAATGGAAGAAGAAACAAAGATGCTGAAAGAAGCTTTGGCTAAACGTAACAGTGAGTTGCAGGCCTCAAGGAGTATGTGCGCCAAAACACTGAGCAAACTTCAAAGTTTGGAAGCACAGTCTCAGACAAGTAACCAGCTGAAAGGATCTCCAACATCCATCGTCCAGATAACTCACGAAAACATATATAATCAAAATGCAAGCAGTGCACCAAGTTTCGTCTCCATGTCCGAAGATGGAAATGACGATGCAGTAAGTTGTGCTGAATCTTGGTCTACAGCAATAGTTCCTGGGCATTCCCAATTTCCTAAAGAAAAGTGCACTGAGGAATCAAGCAAATCTGAGGTCTCTAATAAGTTGGAACTAATGGATGACTTCCTGGAGGTTGAGAAGTTGGCTCGTTTGTCAAATGATTCCAATGCAGACGCCACTGTTTCAGTTTCTTCAAACAATAAGACAACTGACACTGTGACTGATGATGTATCAGAAGCCCGTATTGGCAAAGAAGGTCCGTCTGAAAAAAATGGCAATTCAAATCCATTGCCAAATAAAGTGTCTTCTGATGCTTTGTTGTCAGCCCCCGATCCTCAATCTGATGCTAGTGGCTTGATGTTAACAGAACTTAGATCAAGAATATTGCTGGTTTTTGAATCCTTATCCAAGGATGCTGACATAGAGAAGATTGTGGAGGATATCAAACATGTGATTGAAGATTCGCATGACATTACTATCCGCCACTCGGTGGATGCCCATCCTTCCGATGCTACGTGTGATAGGAAGGATGATCTTGAAGATGCTGGCTTAAACCTTCAAAAGGACATCATTTCATCCCAGCAACCCGGAGAACATGTGCGTGTAACTTCAGATTTGGAAGCTGCTATTTGTCAGATTCACGAATTTGTACTGCTCCTTGGCAAGGAAGCAATGACATTTCATGACATCTCTTATGACGGAAATGAAATGAGGCAAAAGATTGAGGACTTCTCCGTCACATTTGATAAAATATTAAGCAACAATGCAAGTTTGCTACAGTTTGTTCTTGACCTGTCCTATGTTCTAGATAAAGCAAGCGAGTTCAGATTTAATGTTCTCGGCTACAAGGGCACAGAAGTTGAAAGTAACAGTCCTGATTGCATAGATAAGATTGCTCTGCCAGAAAATAAATTAGTACAAGACAATTCATCCGGAGAAAGATATCAAACTGGCTGTTCCCATATTCTTAGTTCGTCTTCTAATCCTGAGGTTCCCGACGATGGGAATTTAGTCTCAGGTTTTAGAGTGGACGCTGCATCACAAAAACTGTCAATGCAAAAGTTTGAAGAATTGAAACTAGAGAAAGAAAAACTGGTGACTGATCTGTCAAATTGTACTGAAACTCTTGAAATAACCAAGTCTCAGTTGCTAGAGACTGAGCAACTTCTAGCTGAAGTTAAATCACAATTGGCTTCTGCTAGAAAATCAAACAGCTTGGCTGAGACGCAGCTAAAGTGTATGGCAGAATCGTACAAGTCTCTTGAAACACGTGCCCAGGACTTGGAAACTGAGGTGAACCGTCTGCAAATTAAGGTAGAATCTCTGGAGAATGAACTTCAAGATGAAAAGAAGGCTCATGAAGCTGCTTTGACTCGGAGCAAGGATATAGAAGAGCAGTTACAAAGGATTGAGTACTCGGCAGCTGATGATGACCACAAGACTTCGCATGATAGAGATTTGACAGCTGCTGCTGAAAAGCTAGCGGAGTGTCAGGAAACCATACTTCTTCTGGGCAAGCAGTTAAATGCTCTACGTCCACAAACTGAGTTAATCGATTCATCGTACAGTAAGTTAAACCCGAATGATGAAGGATTCGCAGAAGATGAACCCACCACCAATGGTCCAAAATTTCAAGAATTAGGGCAGACGGAGATGGACCATGCTACTTCTGCTTTCGTTCAAAGATTGAGTTCGGAGTCTCCGTTACATTTTTCCAACAGTTTATTTAGCCCTTCGGACAGCGAGTCCACCCTTCCAGCCAGATCCCCAGTACAGCAATCCAAATCAAAACCAAAACACAGACCCACCAAGTCAGCCTCTTCTTCAGTTTCTTCTGCAACTACACCCGAGAAGCATGCAAGGGGATTTAGTAGATTCTTTTCACCAAAAGGAAAATCCGGTCATTAA 3243 0.4252 MDRRWPWKKKSSEKAVIEKAATALDSSDASQNQDNKKPNYVQISVESYTHLSSLDDQVKTYEEKVQALEDEVKEINEKLSAANSEINTKESMVKQHAKVAEEAVSGWEKAESEALALKNHLESVTLLKLTAEDRATHLDGALKECMRQIRNLKEEHDLKIQEVALSKTKQLDKIKGELEAKIANFEQELLRSAAENGALSRSLQERSNMLIKLSEDKARAEAEIELLKGNIEACERENNSLKYELHVVSKELEIRNEEKNMSLRSAEAANKQHMEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKLEVESLGRDFGESRLRKSPVKPASPNLSPLPDFSLENVQKFQKDNEFLTERLLAMEEETKMLKEALAKRNSELQASRSMCAKTLSKLQSLEAQSQTSNQLKGSPTSIVQITHENIYNQNASSAPSFVSMSEDGNDDAVSCAESWSTAIVPGHSQFPKEKCTEESSKSEVSNKLELMDDFLEVEKLARLSNDSNADATVSVSSNNKTTDTVTDDVSEARIGKEGPSEKNGNSNPLPNKVSSDALLSAPDPQSDASGLMLTELRSRILLVFESLSKDADIEKIVEDIKHVIEDSHDITIRHSVDAHPSDATCDRKDDLEDAGLNLQKDIISSQQPGEHVRVTSDLEAAICQIHEFVLLLGKEAMTFHDISYDGNEMRQKIEDFSVTFDKILSNNASLLQFVLDLSYVLDKASEFRFNVLGYKGTEVESNSPDCIDKIALPENKLVQDNSSGERYQTGCSHILSSSSNPEVPDDGNLVSGFRVDAASQKLSMQKFEELKLEKEKLVTDLSNCTETLEITKSQLLETEQLLAEVKSQLASARKSNSLAETQLKCMAESYKSLETRAQDLETEVNRLQIKVESLENELQDEKKAHEAALTRSKDIEEQLQRIEYSAADDDHKTSHDRDLTAAAEKLAECQETILLLGKQLNALRPQTELIDSSYSKLNPNDEGFAEDEPTTNGPKFQELGQTEMDHATSAFVQRLSSESPLHFSNSLFSPSDSESTLPARSPVQQSKSKPKHRPTKSASSSVSSATTPEKHARGFSRFFSPKGKSGH* 1081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1642 1080 Coils Coil 346 373 - -
Vra5g1642 1080 MobiDBLite consensus disorder prediction 500 559 - -
Vra5g1642 1080 MobiDBLite consensus disorder prediction 966 990 - -
Vra5g1642 1080 Coils Coil 51 92 - -
Vra5g1642 1080 Pfam Filament-like plant protein, long coiled-coil 89 962 IPR008587 -
Vra5g1642 1080 MobiDBLite consensus disorder prediction 1016 1038 - -
Vra5g1642 1080 SUPERFAMILY Tropomyosin 798 960 - -
Vra5g1642 1080 MobiDBLite consensus disorder prediction 500 518 - -
Vra5g1642 1080 MobiDBLite consensus disorder prediction 1048 1063 - -
Vra5g1642 1080 Coils Coil 821 911 - -
Vra5g1642 1080 MobiDBLite consensus disorder prediction 1016 1080 - -
Vra5g1642 1080 Coils Coil 135 162 - -
Vra5g1642 1080 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 1080 - -
Vra5g1642 1080 Coils Coil 168 195 - -
Vra5g1642 1080 MobiDBLite consensus disorder prediction 533 555 - -
Vra5g1642 1080 PANTHER FILAMENT-PLANT-LIKE PROTEIN 1 1080 - -
Vra5g1642 1080 Coils Coil 203 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1642 Vra-Chr5 22836180 22841969 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1642 5 22836180 22841969 Vra5g1642 5 22836180 22841969 ECH
Vra6g2046 6 37007016 37013189 Vra5g1642 5 22836180 22841969 PCT