Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1640 ATGGGTTCCGTGTCTCTGAAAATAGGCGACGGCACTGCCAGATTCAGAAGAGCAACCGTGTGTTCCTCCGGAGTTAACATTCTCATGATATTCTCCGTTATCATCACCAACCTCTTTGCTCTCTATGCCTTCTCTTCTTCCACAAAAGATCTTCACAACCACCACCTTCTTCACAAAAACTTCTCCCTCATCTCCGAACAAGTCACCCTCATTCTACAAGAGATCGATTTGTCGCAAAAGAAACTTGCCCAGATGGAAAAGGAACTCCTCGGCTACCAAAGCATTGACCTTTCCCGAACTAACACCTCCAACGAACTCAAACTCTTTCTCCACCGCCACCACCTTCCTTTGGGCAAAGACTCGAAAACTGGAATCACCGAAATGGTCTCGTCTGTGGGCCACTCCTGCGACAAATCCTCGAACTTGTTGTATCAGTACATGAATTACAAGGTTTCTGGACCCTGCCCCAATGATTTGAGTGTGGCACAGAAACTCGTTCTGAAAGGGTGTGAGCCTTTACCGAGAAGAAGGTGTTTTTCTAAAACCATATCTAAGGTGGGTCTTCTACGCCCTTTTCCCACCTCGCTTTGGGAACCTCCAGTTAACAACACTGTTAACTGGAGTGGTTTAGGTTGCAAGAGTTTTGAGTGTTTGAAGGGTAAAAAGTTGAGTAGAGATTGCATTGATTGCTTTGATTTGGTAAATGGATATGAGAATCAGAGATTTGTGAAGTCTAGGAGTAAGAATGATTTTCTAGTTGATGATGTGTTAACTCTGGGAGGTGGAGGAATTAGGATAGGGCTTGATGTTGGAGGTGGGTCTGGGTCCTTTGGTGCTGTGATGGCTGAGAGGAATGTCACTGTGGTTACTACCACTTTGAATGTTGGTGCTCCATTCAGTGAATTCATTGCTGCAAGAGGACTTTTTCCTCTATTTTTGAGCTTGGATCATAGGTTCCCGTTTTATGACAATGTGTTCGATTTGGTGCGTGCTGCGAGTGGTTTGGATGGTGGGGGGAGGCACGAGAAATTGGAGTTTTTGATGTTTGACATTGATCGTGTTTTGCGGCCAGGTGGTTTGTTTTGGCTCGATAACTTCTATTGTGTTGATGAAGAGAAGAAAAGGGTGTTAACCAGGTTGATTGAACGGTTCGGGTACAAAAAGTTGAAATGGGTTGTGGGAGAAAAGGTTGATAGTCTTGGATCAGGTAAGTCACAGGCTGTGTTATCAGCAGTGCTTCAGAAGCATGTTAGAGTGTAA 1260 0.4468 MGSVSLKIGDGTARFRRATVCSSGVNILMIFSVIITNLFALYAFSSSTKDLHNHHLLHKNFSLISEQVTLILQEIDLSQKKLAQMEKELLGYQSIDLSRTNTSNELKLFLHRHHLPLGKDSKTGITEMVSSVGHSCDKSSNLLYQYMNYKVSGPCPNDLSVAQKLVLKGCEPLPRRRCFSKTISKVGLLRPFPTSLWEPPVNNTVNWSGLGCKSFECLKGKKLSRDCIDCFDLVNGYENQRFVKSRSKNDFLVDDVLTLGGGGIRIGLDVGGGSGSFGAVMAERNVTVVTTTLNVGAPFSEFIAARGLFPLFLSLDHRFPFYDNVFDLVRAASGLDGGGRHEKLEFLMFDIDRVLRPGGLFWLDNFYCVDEEKKRVLTRLIERFGYKKLKWVVGEKVDSLGSGKSQAVLSAVLQKHVRV* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1640 419 Coils Coil 68 88 - -
Vra5g1640 419 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN-RELATED 1 419 - -
Vra5g1640 419 Gene3D Vaccinia Virus protein VP39 235 392 IPR029063 -
Vra5g1640 419 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 252 381 IPR029063 -
Vra5g1640 419 PANTHER S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN 1 419 - -
Vra5g1640 419 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 260 369 IPR004159 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1640 Vra-Chr5 22819578 22821091 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1640 5 22819578 22821091 Vra5g1640 5 22819578 22821091 ECH
Vra6g2050 6 37091293 37093022 Vra5g1640 5 22819578 22821091 PCT