Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1634 ATGGCTACACATCACCTTTTTCTTCTACCTACCATCTTCTTCCACCTTCTTCTCCTGTTCTCCCTTACCCTTCCCTTCCCCTCCCAAGCTACCAATGCCCAATGGCAGATACTCCAAAAATCCATAGGCATCGTCGCTATGCACATGCAGCTCCTCAACAATGACCGTGTCATCATCTTCGACCGCACCGATTTCGGCTCTTCCAACCTCACTCTCCCCAACGGCAACTGTCGTCACGATAACTCAGAAATTGTTATCAAAACAGACTGCACCGCTCACTCCATCGAATACGACGTCGCATCCAACACCTTCCGCGCTCTCTTCGTCCAAACAGACGTCTGGTGCTCCTCCGGCGGTGCCGTCGCCGACGGCACCCTCATCCAAACCGGCGGGTACAATGACGGCGAACGAAAAATAAGGTCCTTCGCTCCATGCGAAACAGGTGAGAACTGTGAGTGGCAAGAAACCGACAACGCCCTGGCAGTAAAAAGATGGTACTCCGCCAATCACTATTTGCCAGATGGACGACAAATTATAATCGGAGGGAGATGGCAATTCAACTACGAGTTTCATCCTAAGCGAAAAACAGAAGAGAATAACAAACCCTACGTGTTACCGTTTCTGCTTGAGACTCATGATAAGGGTGCGGAAAATAATCTTTATCCGTTTGTTGTTTTAAATGTGGACGGAAATCTTTTTATTTTTGCCAACAACCGTGCTATTCTGTTTGATTACCAGAACGACGCCGTTGTGAGAACGTACCCCGAGATACCCGGGGGAGACCCTAGGTGTTATCCTAGTACCGGTTCAGCGGTGTTGCTACCACTTAAGAATTTGGAAGCGGCGACGGTGGAAGCTGAGGTTTTGGTCTGCGGTGGGGCCCGCAGAGGGGCTTTTCAGCTTGTGCACAAGGGCGTTTTCTCCAAAGCAATGGATTCTTGCGCGCGGATTAAGATCACGGATCCGAATGCCACGTGGGCGGTGGAGACCATGCCGATGGGGCGGGTGATGGGTGACATGGTCATGCTCCCCAACGGCGACGTTTTGATCATAAACGGAGCTCAATCTGGAACAGCGGGATGGGGGAATGCAGAGAATCCGGCTCTTCAACCGGTTATTTATAGAACCAACGGTTCGGGTGGGTCGCGGTTCATGTTGCAACCCGCTTCGGATATTCCGAGAATGTATCATTCGACGGCCGTTCTGGTTCGTGATGGAAGAGTGATCGTAGGTGGGAGCAATCCTCACGAGAAATACGTGTTCTCTAATGTGTCATATCCTACGGAGTTGAGTTTGGAAGCTTTTTCTCCTTACTATCTGGACTCTGAGTTTGAGGCTGTACGTCCCATTATTGTAGAGCCTTGTTCTTACGTGAAGTTGATGTATGGCGAGAAATTGAAGATGAGTATTAAGGTGAATGGAAGGGTGGTGCCTGAGTTATTGTCCGTGACGATGTTAGCGCCGCCTTTTAACACGCACTCTTTTTCCATGAGTCAGAGGTTGTTGGTGTTGTCGATGGGTGAAGTTAAGGTGAGGGGAAATTCAAGTTGTGAATTTGAGGTGACGGCGCCAGGTTCACCTGTTCTTGCACCACCGACGTTTTATATGCTATTTGCGGTTCATGGAGACATTCCCAGCGAGGGAATTTGGATCAAGATGCAATGA 1665 0.4961 MATHHLFLLPTIFFHLLLLFSLTLPFPSQATNAQWQILQKSIGIVAMHMQLLNNDRVIIFDRTDFGSSNLTLPNGNCRHDNSEIVIKTDCTAHSIEYDVASNTFRALFVQTDVWCSSGGAVADGTLIQTGGYNDGERKIRSFAPCETGENCEWQETDNALAVKRWYSANHYLPDGRQIIIGGRWQFNYEFHPKRKTEENNKPYVLPFLLETHDKGAENNLYPFVVLNVDGNLFIFANNRAILFDYQNDAVVRTYPEIPGGDPRCYPSTGSAVLLPLKNLEAATVEAEVLVCGGARRGAFQLVHKGVFSKAMDSCARIKITDPNATWAVETMPMGRVMGDMVMLPNGDVLIINGAQSGTAGWGNAENPALQPVIYRTNGSGGSRFMLQPASDIPRMYHSTAVLVRDGRVIVGGSNPHEKYVFSNVSYPTELSLEAFSPYYLDSEFEAVRPIIVEPCSYVKLMYGEKLKMSIKVNGRVVPELLSVTMLAPPFNTHSFSMSQRLLVLSMGEVKVRGNSSCEFEVTAPGSPVLAPPTFYMLFAVHGDIPSEGIWIKMQ* 555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1634 554 Pfam Glyoxal oxidase N-terminus 47 293 IPR009880 -
Vra5g1634 554 PANTHER SECRETED PROTEIN-RELATED 24 554 - -
Vra5g1634 554 Gene3D Immunoglobulins 447 554 IPR013783 -
Vra5g1634 554 PANTHER OXIDASE, PUTATIVE, EXPRESSED-RELATED 24 554 - -
Vra5g1634 554 Gene3D - 29 444 IPR037293 -
Vra5g1634 554 SUPERFAMILY E set domains 445 553 IPR014756 -
Vra5g1634 554 CDD E_set_GO_C 444 553 IPR015202 -
Vra5g1634 554 SUPERFAMILY Galactose oxidase, central domain 94 441 IPR011043 -
Vra5g1634 554 Pfam Galactose oxidase-like, Early set domain 448 552 IPR015202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1634 Vra-Chr5 22773995 22775831 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1634 5 22773995 22775831 Vra6g2056 6 37181365 37183403 PCT