Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1614 ATGGCATTCCCACAGCTTATCCCTTCTCCTACTTCTTCTTCCTTACCTCACAAACCCTCCTCAAATCCTATAACACTCTCCCTAAACCCTAAATCCTCAAACTCTCTGCACCATCTCAATCTCGCGGTTCTCCGCCACCGCTGCCGGAAGCTTAATTCCACTCTCCGCTGCTCTGCATCTTCCTTCTCCGAGAAGCACCACACGAACTCCCCCAACTCCGATGACGTCGTCGAGCTTCCTCTCTTTCCTCTCCCTCTGGTGCTCTTCCCCGGCGCCATCCTCCCCTTGCAGATCTTCGAGTTCCGCTACCGCATCATGATGCACACACTCCTCCAAACAGACCTCCGCTTCGGCGTCATCTACACGGATGCCGTCTCCGGAACAGCCGCCGTTGGCTGCGTCGGCGAAGTCATAAAGCATGAGCGCCTCGTGGATGACCGCTTTTTCCTCATCTGTAAGGGTCAGGAACGGTTCCGAGTAAACAGTGTGGTGCGCACGAAACCCTACCTGGTCGCGCAGGTGACGTGGCTCGAGGACCGGCCATCTCCCTCCACCGACCTCGATCTGGACAGGCTGGCCACCGAGGTGGAGACCTACATGAAGGACGTTATCCGGTTATCCAACCGGTTGGGAGGGAAACCGGAGAAGGAGGTTGGGGATTTGAGAAGAAACCTGTTTCCAACGACGTTCTCGTTCTTCGTTGGCAGCACCTTCGAGGGTGCGCCAAGGGAGCAACAAGCGCTGCTTGAATTGGAGGACACCGCCGCCAGATTGACGAGGGAGAAGGAAACATTGAAGAACACTCTTAATTACCTTACTGCTGCTTCTGCTGTTAAAGATGTTTTTCCCTCTTCTACCAATTCTTCTTGA 870 0.546 MAFPQLIPSPTSSSLPHKPSSNPITLSLNPKSSNSLHHLNLAVLRHRCRKLNSTLRCSASSFSEKHHTNSPNSDDVVELPLFPLPLVLFPGAILPLQIFEFRYRIMMHTLLQTDLRFGVIYTDAVSGTAAVGCVGEVIKHERLVDDRFFLICKGQERFRVNSVVRTKPYLVAQVTWLEDRPSPSTDLDLDRLATEVETYMKDVIRLSNRLGGKPEKEVGDLRRNLFPTTFSFFVGSTFEGAPREQQALLELEDTAARLTREKETLKNTLNYLTAASAVKDVFPSSTNSS* 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1614 289 Pfam ATP-dependent protease La (LON) substrate-binding domain 78 266 IPR003111 -
Vra5g1614 289 Gene3D - 76 179 IPR046336 -
Vra5g1614 289 PANTHER ATP-DEPENDENT PROTEASE LA (LON) DOMAIN PROTEIN 1 285 - -
Vra5g1614 289 SUPERFAMILY PUA domain-like 78 266 IPR015947 -
Vra5g1614 289 Coils Coil 189 209 - -
Vra5g1614 289 SMART lon_5 78 267 IPR003111 -
Vra5g1614 289 ProSiteProfiles Lon N-terminal domain profile. 79 267 IPR003111 -
Vra5g1614 289 MobiDBLite consensus disorder prediction 1 23 - -
Vra5g1614 289 Coils Coil 241 275 - -
Vra5g1614 289 PANTHER ATP-DEPENDENT PROTEASE LA (LON) DOMAIN PROTEIN 1 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1614 Vra-Chr5 22572456 22573568 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1614 5 22572456 22573568 Vra5g1614 5 22572456 22573568 ECH
Vra6g2071 6 37323033 37324386 Vra5g1614 5 22572456 22573568 PCT