Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1613 ATGGCCGCCGAAGAGGGACAAGTTATCGGTGTTCACACCGTCAGTGACTGGAAGGAACGTCTCGAGAAGGGAAAAGAGGCCAACAAGCTCATTGTGGTGGATTTCACCGCTTCTTGGTGCGGTCCATGCCGATTCATTGCTCCAATCCTAGCTGAGATTGCTAAAAAGATGCCCCGTGTCACCTTTCTCAAGGTTGATGTAGATGAACTGGAGTCTGTTTCAAAAGAGTGGGAGATTGAAGCTATGCCAACCTTCCTTTTCTTGAAAGAAGGCAAGCTGGTGGACAAGGTTGTGGGAGCCAAGAAAGATGAGCTGCAAGCGAAAATAACCTTGCATGCAGATGCTGCTGCTGCTGGTAGTTCCATATGA 369 0.4878 MAAEEGQVIGVHTVSDWKERLEKGKEANKLIVVDFTASWCGPCRFIAPILAEIAKKMPRVTFLKVDVDELESVSKEWEIEAMPTFLFLKEGKLVDKVVGAKKDELQAKITLHADAAAAGSSI* 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1613 122 ProSitePatterns Thioredoxin family active site. 32 50 IPR017937 -
Vra5g1613 122 Gene3D Glutaredoxin 1 118 - -
Vra5g1613 122 ProSiteProfiles Thioredoxin domain profile. 1 114 IPR013766 -
Vra5g1613 122 SUPERFAMILY Thioredoxin-like 5 112 IPR036249 -
Vra5g1613 122 PRINTS Thioredoxin family signature 31 39 - -
Vra5g1613 122 PRINTS Thioredoxin family signature 39 48 - -
Vra5g1613 122 PRINTS Thioredoxin family signature 78 89 - -
Vra5g1613 122 CDD TRX_family 19 109 - -
Vra5g1613 122 Pfam Thioredoxin 11 109 IPR013766 -
Vra5g1613 122 PANTHER THIOREDOXIN 3 116 - -
Vra5g1613 122 PANTHER THIOREDOXIN 3 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1613 Vra-Chr5 22565128 22566691 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1613 5 22565128 22566691 Vra5g1613 5 22565128 22566691 ECH
Vra6g2072 6 37329528 37330716 Vra5g1613 5 22565128 22566691 PCT