Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1612 ATGGAAACCATTACCAATTTAGTTTCCAAGTTACTCACTTTGTTTTTCACGCTCTTGTTTGTCGGTTCTCAGCTGATACACTGTAATGTCACCTATGATAAAAAGTCTCTTCTCATCAATGGCCAAAGGAGAATCCTCATTTCTGGCTCCATTCACTATCCCAGAAGCACCCCTGAGATGTGGGAGGATCTAATTAGGAAGGCCAAACATGGAGGTCTTGATGTCATAGACACTTATGTCTTCTGGGATGTCCATGAACCATCTCCTGGCAATTATAATTTTGAAGGAAGGTATGATCTAGTACGGTTTATTAAGACGGTGCAGAAGGTGGGGCTTTATGCCAACCTTCGAATTGGACCTTACGTGTGCGCTGAGTGGAACTTTGGAGGAATCCCTGTATGGTTGAAGTATGTTCCTGGTGTGAGCTTCAGAACGGATAATGAGCCTTTCAAGGCAGCAATGCAAGGTTTCACGGAGAAAATTGTCCAGATGATGAAGACTGAGAAGTTGTTTCAGTCTCAGGGTGGTCCAATAATTCTCTCCCAGATTGAGAATGAGTACGGACCAGAGAGCAGGGCAATGGGAGCTGCTGGTCGTGCGTACTTAAACTGGGCTGCAAGCATGGCTGTTGGATTGGGTACAGGAGTGCCCTGGGTGATGTGCAAGGAAAATGATGCCCCAGATCCCGTGATCAATTCATGTAATGGTTTTTACTGTGATGATTTCACTCCAAATAAACCATACAAGCCTACCATGTGGACTGAGTCTTGGAGTGGCTGGTTTACAGATTTTGGTGGCCCAATTCACCAGCGACCAGTTCAGGATCTATCATTTGCAGTTGCTCGATTCATTCAAAAGGGTGGCTCATATGTGAATTATTACATGTATCATGGAGGAACTAACTTTGGACGATCAGCTGGGGGCCCATTCATTACTACAAGCTATGACTATGACGCTCCAATTGATGAATATGGTTTGATCAGGCAACCAAAATACAGTCATTTGAAGGAGCTTCATAGAGCTATCAAGCGGTGTGAACATGCTTTGGTTTCTTCGGATCCCACAGTTGCGTCGTTAGGAAATCAACAGCAGGCTCATGTATACTCTTCAGGTACTGGAACATGTGCAGCTTTTCTAGCAAACTATAATGCAAACTCTGCTGCTACGGTGACATTCAATAACAGGAACTATGATTTGCCTCCTTGGTCCATAAGCATTCTTCCTGATTGCAAAACTGATGTATTTAATACTGCAAAAGTGAGAGTTCAAACTTCAGAGGTAAAAATGCTTCCTGTCAGTACTAAGTTGTTCTCATGGGAGAGCTATGATGAAGATCTATCTTCTCTGGCTGAGAGTTCAAGGATTACATCTCCTGGACTTTTAGAACAACTCAACGTTACCAGGGACACCAGTGACTACCTATGGTACATAACCAGTATTGACATAAGTTCATCGGAAACCTTTCTTCGAGATGGAAAGAAACCCAGCATTAATGTGCAGTCTGCTGGAGACGCTGTTCATGTGTTCGTTAATGGGAAATTTTCAGGGTCGGCTTTTGGGACAAGGGAGCAGAGAAGTTGCACATTCAATGGACCTATAGATCTCCACGCTGGAACAAATAAAATTGCTCTTCTCAGCGTGACTGTTGGATTACCTAACGTTGGTCGGCATTATGAAACATGGGAGACAGGGATCACTGGTCCAGTCTTGCTACACGGTCTTGACAAGGGACAGAAAGATTTAACATGGAATAAGTGGTCATACAAGGTTGGCCTAAGAGGAGAGGATATGGATTTGACGTCTCCCGATGGGGTGTCGTCTGTTGATTGGGTCCAAGAATCACAAGGTACACAAAGTCGGTCGCAATTGAAATGGTACAAGCTGCAGGCTTATTTTGATGCACCTGGTGGAAAGGAACCACTGGCTTTGGACCTAGAAAGCATGGGTAAGGGTCAAGTATGGATCAACAGACAGAGCATAGGGAGATATTGGTTGGCCTATGCAAAGGGTGATTGTAATTCTTGCACCTATTCTGGAGGCTTTCGCCCTGTAAAATGCCAACTTGGTTGTGGCCAACCTACTCAGCGATGGTATCACGTTCCAAGGTCCTGGCTAAAACCAACGAAGAACTTGATCGTAGTGTTGGAAGAATTAGGCGGAAATCCTTGGAAAATCTCTTTGGTTAAGAGAGTGGTACATACTCCGGCAGGTCATGGGCAGTGA 2223 0.4449 METITNLVSKLLTLFFTLLFVGSQLIHCNVTYDKKSLLINGQRRILISGSIHYPRSTPEMWEDLIRKAKHGGLDVIDTYVFWDVHEPSPGNYNFEGRYDLVRFIKTVQKVGLYANLRIGPYVCAEWNFGGIPVWLKYVPGVSFRTDNEPFKAAMQGFTEKIVQMMKTEKLFQSQGGPIILSQIENEYGPESRAMGAAGRAYLNWAASMAVGLGTGVPWVMCKENDAPDPVINSCNGFYCDDFTPNKPYKPTMWTESWSGWFTDFGGPIHQRPVQDLSFAVARFIQKGGSYVNYYMYHGGTNFGRSAGGPFITTSYDYDAPIDEYGLIRQPKYSHLKELHRAIKRCEHALVSSDPTVASLGNQQQAHVYSSGTGTCAAFLANYNANSAATVTFNNRNYDLPPWSISILPDCKTDVFNTAKVRVQTSEVKMLPVSTKLFSWESYDEDLSSLAESSRITSPGLLEQLNVTRDTSDYLWYITSIDISSSETFLRDGKKPSINVQSAGDAVHVFVNGKFSGSAFGTREQRSCTFNGPIDLHAGTNKIALLSVTVGLPNVGRHYETWETGITGPVLLHGLDKGQKDLTWNKWSYKVGLRGEDMDLTSPDGVSSVDWVQESQGTQSRSQLKWYKLQAYFDAPGGKEPLALDLESMGKGQVWINRQSIGRYWLAYAKGDCNSCTYSGGFRPVKCQLGCGQPTQRWYHVPRSWLKPTKNLIVVLEELGGNPWKISLVKRVVHTPAGHGQ* 741
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1612 740 Gene3D - 440 588 - -
Vra5g1612 740 PRINTS Glycosyl hydrolase family 35 signature 40 57 IPR001944 GO:0004553|GO:0005975
Vra5g1612 740 PRINTS Glycosyl hydrolase family 35 signature 61 79 IPR001944 GO:0004553|GO:0005975
Vra5g1612 740 PRINTS Glycosyl hydrolase family 35 signature 116 135 IPR001944 GO:0004553|GO:0005975
Vra5g1612 740 PRINTS Glycosyl hydrolase family 35 signature 173 188 IPR001944 GO:0004553|GO:0005975
Vra5g1612 740 PRINTS Glycosyl hydrolase family 35 signature 252 267 IPR001944 GO:0004553|GO:0005975
Vra5g1612 740 PRINTS Glycosyl hydrolase family 35 signature 289 304 IPR001944 GO:0004553|GO:0005975
Vra5g1612 740 PRINTS Glycosyl hydrolase family 35 signature 309 325 IPR001944 GO:0004553|GO:0005975
Vra5g1612 740 PRINTS Glycosyl hydrolase family 35 signature 650 666 IPR001944 GO:0004553|GO:0005975
Vra5g1612 740 Gene3D - 605 735 - -
Vra5g1612 740 Pfam Beta-sandwich domain in beta galactosidase 349 420 IPR041392 -
Vra5g1612 740 Pfam Glycosyl hydrolases family 35 36 341 IPR031330 -
Vra5g1612 740 PANTHER BETA-GALACTOSIDASE RELATED 3 739 IPR001944 GO:0004553|GO:0005975
Vra5g1612 740 SUPERFAMILY Galactose-binding domain-like 404 575 IPR008979 -
Vra5g1612 740 SUPERFAMILY Galactose-binding domain-like 583 733 IPR008979 -
Vra5g1612 740 PANTHER BETA-GALACTOSIDASE 3 739 - -
Vra5g1612 740 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 175 187 IPR019801 GO:0004553|GO:0005975
Vra5g1612 740 SUPERFAMILY (Trans)glycosidases 29 345 IPR017853 -
Vra5g1612 740 Gene3D Glycosidases 23 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1612 Vra-Chr5 22557760 22562979 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1612 5 22557760 22562979 Vra11g0740 11 5972842 5978516 ECH
Vra5g1612 5 22557760 22562979 Vra5g1612 5 22557760 22562979 ECH
Vra6g2073 6 37331062 37336301 Vra5g1612 5 22557760 22562979 PCT