Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1531 ATGAACACCAGCATCAAGCCCAAGCTGTACCATAAGAAACCTCCCATCACGGTGTCACATGAAAGGGCAGAGATGCGGGAAAGCTCGCGAGGGAGAGCGAATGGTTCAGTTAAGGGTGGAAAAACATCGAGCAAAGATAGAAAACTGGCTTTACAGAAAGATGTCGACAGGTTGAAGAAAAAGCTTAGGCGTGAAGAGAACATACACAGAGCATTGGAGAGAGCTTTCAACAGGCCTTTGGGAGCTCTGCCTCGTCTTCCTCCGTATCTCCCTCCCTACACACTAGGACTTCTGGCTGAGGTGGCAGTACTGGAAGAAGAAATTGTTAGGCTTGAAGAACAGGTTGTGCATTTCAGGCAGGACTTGTACCAGGAAGCTGTGTACATGTCATCCTCTAAGATGAAACTGGAGCAATCAGCCGGTGTTAGCAATTCAAGTCCGCAGAGTAGTCCCAAACTGGTTAAAGAGGAGTCCCTTTCCCAGACGCTGGATAATGCTGCAAGATCTGGAACTATGTCTATAACACTTCCAAAGGATAGACATGGAAAAGAGAACCAAACATGTACTAATTCTTCCAAGAGTAGCAAACAGTCCATATGCAAAGGCCAGACTACCAAATCGCCGATTAAGAAACTCCCCATCGACAATAAATCACCACAGAAACGTTGGGATCCTCCAAAAAAGCAGCAAGAACTAAGGGTGAAAGACCTGCCAATTGCAGAAGTGAGAAACCATAGTCTACACGACAAACCAAAAGGGGGAGAAAGTCCAAATATAATATCCGAAATTATTCTGAAGTGTTTATCAAGCATTCTCTTGAGAATGAGTACTGCGAAGAATTTGGATTCTGCAGGTAATGTACCACACTCATGGATTCCAAAATCTAGTAAAAACTGCGTTGAAGGAAGTGAGTTTTGGGATCCTTATGGTATCTGTTTCGAATTCGGAAAGAGGGATATTGGTCCATACAAGCAATTATGTGCAATTGAAGCCAAATCATTCGATCCAAAACGAACTGCAAAATCTTTGTTTTTACTGCACCGGTTGAAACTTCTTCTGAGAAAACTAGCCTGTGTCAACTTTGATAATCTCAACCACCAGGAGAAGCTTGCATTCTGGATCAACATCTATAACTCATGTATAATGAATGCGTACATAGAAAATGGCATACCGGAGAGTCCTGAAATGGTTGTTGCGCTGATGCAGAAGGCCACAATAAATGTGGGTGGACACTTGCTAAGTGCAACAACTATAGAACATGGCATTTTAAGACTTCCTTATCACTTCAAATTTCTAAATTGTAAACAGACAACATTATCAAAGGGAGGGAAAAATCATGAAACTTATGGACTAGAATTGTCAGAACCCCTGGTGACATTTGCTCTATCCTGTGGAACTTGGTCCTCTCCTGCTGTGAGAATTTACACAGCATCTCGGGTTGAGAACGAACTTGAGATGGCCAAAAAGGAATACTTACAGGCTGCAGTTGGAATTTCGAAATCAAAGTTCCTTATCCCGAAGCTGCTGGATTGGTATTTACTGGACTTTGCAAAAGACTTGGAATCATTGCTGGATTGGATTTGCCTCCAATTACCAAGTGATGTGGGGAAAGAAGCTATCAAGTTCCTTGAGGAAAGAAAAACCGAGCCCCTCTCACAGTTTGTACAGATTATGCCACACGAGTTCAATTTTAGATACTTGTTGTGTACATAG 1713 0.4262 MNTSIKPKLYHKKPPITVSHERAEMRESSRGRANGSVKGGKTSSKDRKLALQKDVDRLKKKLRREENIHRALERAFNRPLGALPRLPPYLPPYTLGLLAEVAVLEEEIVRLEEQVVHFRQDLYQEAVYMSSSKMKLEQSAGVSNSSPQSSPKLVKEESLSQTLDNAARSGTMSITLPKDRHGKENQTCTNSSKSSKQSICKGQTTKSPIKKLPIDNKSPQKRWDPPKKQQELRVKDLPIAEVRNHSLHDKPKGGESPNIISEIILKCLSSILLRMSTAKNLDSAGNVPHSWIPKSSKNCVEGSEFWDPYGICFEFGKRDIGPYKQLCAIEAKSFDPKRTAKSLFLLHRLKLLLRKLACVNFDNLNHQEKLAFWINIYNSCIMNAYIENGIPESPEMVVALMQKATINVGGHLLSATTIEHGILRLPYHFKFLNCKQTTLSKGGKNHETYGLELSEPLVTFALSCGTWSSPAVRIYTASRVENELEMAKKEYLQAAVGISKSKFLIPKLLDWYLLDFAKDLESLLDWICLQLPSDVGKEAIKFLEERKTEPLSQFVQIMPHEFNFRYLLCT* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1531 570 MobiDBLite consensus disorder prediction 215 252 - -
Vra5g1531 570 Coils Coil 94 121 - -
Vra5g1531 570 Coils Coil 48 75 - -
Vra5g1531 570 MobiDBLite consensus disorder prediction 14 31 - -
Vra5g1531 570 MobiDBLite consensus disorder prediction 138 254 - -
Vra5g1531 570 PANTHER TRANSCRIPTION FACTOR 1 569 - -
Vra5g1531 570 Pfam Leucine-zipper of ternary complex factor MIP1 44 125 IPR025757 -
Vra5g1531 570 Pfam Protein of unknown function, DUF547 362 492 IPR006869 -
Vra5g1531 570 MobiDBLite consensus disorder prediction 187 211 - -
Vra5g1531 570 PANTHER EXPRESSED PROTEIN 1 569 - -
Vra5g1531 570 MobiDBLite consensus disorder prediction 1 50 - -
Vra5g1531 570 MobiDBLite consensus disorder prediction 138 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1531 Vra-Chr5 21947585 21951452 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1531 5 21947585 21951452 Vra5g1531 5 21947585 21951452 ECH
Vra6g1891 6 35520763 35524920 Vra5g1531 5 21947585 21951452 PCT