Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1526 ATGGAGAGATCAAAGTCATCCCTTCTACAGATTCAGCCTCCAACCTATGGAAACTTAGTCACAATTCTCAGCATCGATGGAGGTGGCATTAGGGGCATTATCCCCGCAACTATTCTTGCTTTCCTTGAAGCACAACTTCAGGAATTGGACGGTGAGGATGCAAGGCTTGCAGACTATTTTGATGTGATTGCAGGAACAAGCACTGGTGGTCTTGTAACCGCCATGTTAACTGCTCCAAATGATCGTCAGCGTCCTTTATTTGCTGCCAAGGATATCAGGCCCTTTTACTTGGATCACCTTCCAAAGATTTTCCCTCAACGCAGTGGCATCTGGGGATGGATAGAAAAGGTGGTGAGATCATTAGGAGGACCAAAATACGATGGAAAATACCTTCGAGAAGTGGTGAGAGAGAAGCTGGGGGAGACACGTTTGCATGAAACGTTGACCAATATTGTGATTCCCACCTTTGACATCAAGTCACTGCAGCCAATCATTTTCTCCTCGTACCAAATCAAGATGTCTCCTTATTTGGATGCTCCACTCTCTGACATATGCATCAGCACTTCTGCCGCACCAACTTATCTTCCAGCCCACAGCTTCAAGAACAAAGATTCAGAAGGGAACGTGCACGAATTCAACCTTATTGATGGTGGCGTTTGTGCTAATAATCCGAGCTTAGTAGCCATGAACCAGTTAACCAAGCAGATCATTAATGACAATCCTGACTTCTTCTCCATCAAGCCAATGGAATATGGTCGTTTCCTGATAATCTCTCTGGGTACCGGGACTCCCAAGAATGAGCAGAAATTCAATGCTAAAGTAGCAGCAAAATGGGGTCTACTCGATTGGTTAACTAACAGTGGTTCCTCTCCGTTGATCGATGTTTTAACTCACTCCAGTGGAGATATGGTTGATTTCCATCTTGCTACTGTCACCCAGGCTCTTAATTCAGAAAAAAATTACCTTCGTATACAGGATGATACATTGACCGGTACAGATGCTTCAACTGATATTGCCACGAAAAAAAATATGGAAAAACTTAGCCAAATTGGTGAGAGGTTGTTGAAGAAACCAGTATCTCAGATCAATTTGGAGACTGGTCTGTTTGAACCCTTGGGAGATGGGGAGACCAACGAAGATGCTCTCAGAAGGTAA 1155 0.4407 MERSKSSLLQIQPPTYGNLVTILSIDGGGIRGIIPATILAFLEAQLQELDGEDARLADYFDVIAGTSTGGLVTAMLTAPNDRQRPLFAAKDIRPFYLDHLPKIFPQRSGIWGWIEKVVRSLGGPKYDGKYLREVVREKLGETRLHETLTNIVIPTFDIKSLQPIIFSSYQIKMSPYLDAPLSDICISTSAAPTYLPAHSFKNKDSEGNVHEFNLIDGGVCANNPSLVAMNQLTKQIINDNPDFFSIKPMEYGRFLIISLGTGTPKNEQKFNAKVAAKWGLLDWLTNSGSSPLIDVLTHSSGDMVDFHLATVTQALNSEKNYLRIQDDTLTGTDASTDIATKKNMEKLSQIGERLLKKPVSQINLETGLFEPLGDGETNEDALRR* 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1526 384 PANTHER PATATIN 1 384 - -
Vra5g1526 384 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 23 229 IPR002641 GO:0006629
Vra5g1526 384 PANTHER XYLOSE ISOMERASE 1 384 - -
Vra5g1526 384 SUPERFAMILY FabD/lysophospholipase-like 18 366 IPR016035 -
Vra5g1526 384 Pfam Patatin-like phospholipase 23 228 IPR002641 GO:0006629
Vra5g1526 384 Gene3D Cytosolic phospholipase A2 catalytic domain 10 384 - -
Vra5g1526 384 CDD Pat17_isozyme_like 17 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1526 Vra-Chr5 21892002 21893794 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1526 1 382 Miscellaneous Gene Families AT2G26560 63.613 9.59e-176 493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1882 6 35434560 35437099 Vra5g1526 5 21892002 21893794 PCT