Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1525 ATGGAAATCTCCGTGGAAGTTCCTCCGTACCTTCGAGTGCACAAAGATGGCACCGTTGAGCGAATGGCCGGTATCCAAGTTGTTCCCGCGGGAATCGATCCCAACACCAACGTTGTCTCCAAAGACATTCTCGTCATCCCCGAAGCCGCCGTCACAGCCAGGCTCTACCGTCCAAATTTCACACCTCAAAACGCCAAGCTTCCATTAGTTATCTACTTCCACGGTGGCGCCTTCTGCATCTCTTCCCCCTCCGACCCTCTCTACCACAACTCCCTCAACAAACTCGTTGCAGAGTCGAACGTTGTCGCTCTCTCCCTCAACTATCGCCTCGCACCAGAACACCCTCTTCCAACTGCGTATCAAGACTCTTGGGCCGCAATCCAATGGGTTGCTTCTCAGGCTAAAGCCCCGGAAGATTGGTTCAGGGATAACGTTGACTTTGAGAGAGTGTTCTTGGCAGGGGACAGCGCAGGTGCCAACATAGGACACTACATGGCCCTGAAGTTGAACAATGTTTCAAAAAATGATTTTGAATTGAATGTCAAGGGTCTTGTCATGGTGAACCCTTACTTCTGGGGAAAAGAAGCAATTGGGGTAGAGATTACTGATCCTGAGAGGAAGAAGATGGTGGATGTATGGTGGGATTTTGTTTGTCCTTCTGATAAAGGGAACGATGATCCCCTGATTAACCCGTTTGTGGAGGAGGCTCCGAGTGTTGAAGGGGTGGCTTGCGAGAAGGTGCTTGTGATTGTTGCAGAGAAAGACATTCTGAGGGAAAGGGGGAAACTGTATCACAAAACGTTGAGTAACAGTGGTTGGAAAGGAAAAGCTGAGTTCTACGAGACTCTCGGGGAGGATCACGTGTTTCACATCTTCAATCCCGATTGTGACAAAGCCCAGAGTTTGATTAAACGCATAGCTGAGTTCATCAATGAAGAAAGAGTGAATTGA 951 0.49 MEISVEVPPYLRVHKDGTVERMAGIQVVPAGIDPNTNVVSKDILVIPEAAVTARLYRPNFTPQNAKLPLVIYFHGGAFCISSPSDPLYHNSLNKLVAESNVVALSLNYRLAPEHPLPTAYQDSWAAIQWVASQAKAPEDWFRDNVDFERVFLAGDSAGANIGHYMALKLNNVSKNDFELNVKGLVMVNPYFWGKEAIGVEITDPERKKMVDVWWDFVCPSDKGNDDPLINPFVEEAPSVEGVACEKVLVIVAEKDILRERGKLYHKTLSNSGWKGKAEFYETLGEDHVFHIFNPDCDKAQSLIKRIAEFINEERVN* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1525 316 Pfam alpha/beta hydrolase fold 70 290 IPR013094 GO:0016787
Vra5g1525 316 Gene3D alpha/beta hydrolase 10 315 IPR029058 -
Vra5g1525 316 PANTHER RECEPTOR GID1, PUTATIVE-RELATED 2 311 - -
Vra5g1525 316 SUPERFAMILY alpha/beta-Hydrolases 6 312 IPR029058 -
Vra5g1525 316 PANTHER ARYLACETAMIDE DEACETYLASE 2 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1525 Vra-Chr5 21888803 21889971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1525 2 314 Carbohydrate Esterase AT3G48700 41.104 8.49e-85 256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1525 5 21888803 21889971 Vra5g1525 5 21888803 21889971 ECH
Vra6g1876 6 35386919 35388016 Vra5g1525 5 21888803 21889971 PCT