Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1517 ATGCAAACGGTGGGGAGAATACTGAGTCAGGGCGTGTATACGGTTTCGGGGCCGTTTCATCCGTTCGGAGGCGCCGTCGATATTGTGGTGGTGGAACAGAAAGATGGCAGTTTCAAGTCGTCGCCCTGGTACGTTCGATTCGGCAAATTCCAGGGGGTTTTGAAGTCGAGGGAAAAGGTGGTGGATATCTCTGTCAACGGGGTGCCTGCTGGTTTCCAAATGCATCTCGATCATAAGGGGGAAGCTTACTTTCTCAGGGAAGTCGTTGCACAAGAAGAAGACAATTTGGTGTTTCCGCCTTCTTCTGACAATGATAAAGACGAACACTCTCGCAGGTCCAAGAGTTGCGATTATGATGCAGAGGGTGCGGTAAAGAGTAATTCTCGCCGTTCAAGAATACTTGGATTTGTTTTTGGGAGAAGGTCTTTGAAGCAGAGAGAGGGTAATGGTGAAGCGATTGGGAAAAGGGTGGGTTCGTTGGAGCGAGCTGAGATTGCAGCTAACTTGTTAGACCTCAAGTGGTCCACTAATTTCTCCGGGGAAAAAGGGCAAAAGGTTCTTGCTAACTCGTCTGGGGACGGTAACGTTGTCGTGGACGATGATGAGTTGAAAGAGGAAGCTTGTTTTGGTCGTGAGTGTGACTTGAATCGGAAGGAAGTAGTGTATGATATTGCAGAGTCTGACGTGCAAGTTGCGTGCGTGAAGGTGAAGCTTGTGGAAAAGGAATTGAATGGAGAAGAAGTTTCTGGGGTGAGCGCTGTTGATGCATGTGATAATAGTAATGATATTTCCAAAAACGATGTTTCCGCTGATGGGGTTTACCGTGAAACACCAGAGACCTCCAAGTTGGGCGTGTCGTGTTCTAGTGAACAAGCTGAAGATGTGATGTACCTTGATGGCGCAGCAGAATGTGAAGAAGTCCGCGTCCATGTCCATGATGAAGTCCTGCATCGTGCCACTGTACTGCTATCTGAGGGTACAGAAGCCGTGGAAGTTATTGAGAAGGCCGATCTTGGGATGCCAGTACTGGGGATCTCTGAGTTCCATTCTGGGGTTCAGCAAATAGATTGTTTGGATTCTGGTGATATTATGTATAATGAGGTGGATATTGAAGATCAATCAATATCTACAGCACCTCAAACTGTCAAAATTAGCCTGGGACATTTTTCAGGTGAGAAAGTTGAGCCCAATTATGTTATCAAACCTTCCAGCTACAGCATTCTGGATTACCAAGCCATAAGCGAGAATATGAAGGACAAGGACTTCTCCAGCACATTATCGACTCCTCTGGACCCTGTTGATGATTCTTTACCTAGAAAAGCATCAGGGAGATCACCATCACTAAGTTCAGAGGATGAAAGATTCCTTTTCAGTGACCTTGATGAAAATGCAATCAATAATCGACCTGAGACAACACCCTTCCCTGAACATTTAGATAAAGAAGATCATGTTTCTTATGAGAATGACACTGAAAAGTTAACTGCAATGTCGTGTCCCGTAGTCATTCCTAGAAATGAAGCTGCTGGAGAGAAAGTTGGGCAACATTCGGGATCCTTGCCAAACTTTTCTTCTAGAATTGACATTATGAATCAACATGATGTCCGTTACCCTTTAAGTCAATCACTGCAATCAAGATCAAAATCTTTGCCATGTGCATTTCCTCCAAAAGTTGATTTAGAATTTCTAAAACCTGATGTAGACAAAGGAAACAACCTAACACACGAGGAGTCAGGTACCAAGGATTATCATCATTCTGGGGAAATCAAAGACACAACTCCGAAGCTTCCCCTTGGAGATGATCCATCAACACAGAACCCTTCCCCTGCTGGAAACTGGAGACTTTGGCCTTTCTCCTTGAGGAGAGCTGGATCTAAAGATTCTATATTGTCGCCGTCTCTAAGTGATGCCAAAAACACTACTGATGGTAATTCTCTAGAGAATACTACTAACACAGTTATGAACAAAGATAAACCCAAACCCACAGCAGGATCTAAAGATTCTATATTGCCGCCTTCTCTAAGTGATGCCAAAAACACTACTGATCTAGAGAGTACGATTAGCACCGTTGTGAACAAAGATGAACCCAAACCCAATTTTAAAAAAATAAAGGTTAGGGAAACAACTCCAACTTCTGAAGAAGTAGCCTCCTTGAATCTGAAGGATGGGATGAATACTGTGACCTTCACTTTCTCTACAGCTGTGCTGGGGAATCAGCAGGTCGATGCTCGAATATATCTGTGGAAATGGAACACTCGCATAGTGATCTCTGATGTGGATGGTACAATTACAAGGTCGGATGTTCTTGGTCAGTTCATGCCTTTGGTTGGTATTGACTGGTCACAGACAGGTGTTGCACATTTATACTCTGCTATTAAGGAGAATGGTTACCAACTTCTTTTTCTTAGTGCTCGTTCAATTTCTCAGGCCTATCTTACACGACAATTCCTAGTTAATCTTAAACAGGATGGAAAAGTTTTACCCGATGGTCCTGTTGTTATTTCTCCTGATGGACTTTTTCCTTCTCTGTATCGGGAAGTTATTAGGAGGGTTCCCCACGAATTCAAAATTGCATGCTTAGAGGTCATCAAGGATCTTTTTCCTTCTGATTGCAATCCTTTCTATGCTGGTTTTGGTAATAGGGATACGGATGAAATCAGCTACCTTAAGGTTGGAATTCCCTTGGGAAAAATCTTCATAATTAATCCCAAGGGAGAGGTTGTTGTAAACCGTCGCGTTGACTCAAAATCATATGCTTCTCTGCATGCTCTCGTGAATGGAATATTCCCCCCTACGAACTCCCATGAACAGGAGGACTTTAACTCTTGGAATTTTTGGAAACTACCACCTCCTGCTATAGATATTTGA 2865 0.4356 MQTVGRILSQGVYTVSGPFHPFGGAVDIVVVEQKDGSFKSSPWYVRFGKFQGVLKSREKVVDISVNGVPAGFQMHLDHKGEAYFLREVVAQEEDNLVFPPSSDNDKDEHSRRSKSCDYDAEGAVKSNSRRSRILGFVFGRRSLKQREGNGEAIGKRVGSLERAEIAANLLDLKWSTNFSGEKGQKVLANSSGDGNVVVDDDELKEEACFGRECDLNRKEVVYDIAESDVQVACVKVKLVEKELNGEEVSGVSAVDACDNSNDISKNDVSADGVYRETPETSKLGVSCSSEQAEDVMYLDGAAECEEVRVHVHDEVLHRATVLLSEGTEAVEVIEKADLGMPVLGISEFHSGVQQIDCLDSGDIMYNEVDIEDQSISTAPQTVKISLGHFSGEKVEPNYVIKPSSYSILDYQAISENMKDKDFSSTLSTPLDPVDDSLPRKASGRSPSLSSEDERFLFSDLDENAINNRPETTPFPEHLDKEDHVSYENDTEKLTAMSCPVVIPRNEAAGEKVGQHSGSLPNFSSRIDIMNQHDVRYPLSQSLQSRSKSLPCAFPPKVDLEFLKPDVDKGNNLTHEESGTKDYHHSGEIKDTTPKLPLGDDPSTQNPSPAGNWRLWPFSLRRAGSKDSILSPSLSDAKNTTDGNSLENTTNTVMNKDKPKPTAGSKDSILPPSLSDAKNTTDLESTISTVVNKDEPKPNFKKIKVRETTPTSEEVASLNLKDGMNTVTFTFSTAVLGNQQVDARIYLWKWNTRIVISDVDGTITRSDVLGQFMPLVGIDWSQTGVAHLYSAIKENGYQLLFLSARSISQAYLTRQFLVNLKQDGKVLPDGPVVISPDGLFPSLYREVIRRVPHEFKIACLEVIKDLFPSDCNPFYAGFGNRDTDEISYLKVGIPLGKIFIINPKGEVVVNRRVDSKSYASLHALVNGIFPPTNSHEQEDFNSWNFWKLPPPAIDI* 955
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1517 954 MobiDBLite consensus disorder prediction 563 594 - -
Vra5g1517 954 PANTHER GH19076P 1 954 - -
Vra5g1517 954 MobiDBLite consensus disorder prediction 99 122 - -
Vra5g1517 954 MobiDBLite consensus disorder prediction 96 122 - -
Vra5g1517 954 Pfam LNS2 (Lipin/Ned1/Smp2) 707 929 IPR013209 -
Vra5g1517 954 MobiDBLite consensus disorder prediction 421 452 - -
Vra5g1517 954 MobiDBLite consensus disorder prediction 626 680 - -
Vra5g1517 954 MobiDBLite consensus disorder prediction 597 611 - -
Vra5g1517 954 Pfam lipin, N-terminal conserved region 1 93 IPR007651 -
Vra5g1517 954 SUPERFAMILY HAD-like 745 897 IPR036412 -
Vra5g1517 954 MobiDBLite consensus disorder prediction 626 657 - -
Vra5g1517 954 PANTHER LIPIN 1 954 IPR026058 -
Vra5g1517 954 MobiDBLite consensus disorder prediction 563 614 - -
Vra5g1517 954 SMART lns2 753 909 IPR031315 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1517 Vra-Chr5 21828635 21836630 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1517 5 21828635 21836630 Vra5g1517 5 21828635 21836630 ECH
Vra6g1869 6 35332970 35338521 Vra5g1517 5 21828635 21836630 PCT