Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1506 ATGGAAGATGGTGAGATAGAAGAGGGATCAATAGGTGGTGTAGAGGAAGAGGAGCATTCCTCAGAGCCTCACAAGTCGGAGGAATCGCCCTACGAAATGTTGCGCAACAGCAAGGCTTCCGTAGAGAACATCGTCGCCGACATACTCTCCATTAAAAAAGACCGAAAACCTAAACAACATCTTCAGGATCTCGCTACTCAGATGTTCTTACACTTCATCACTCTTCGCCAGGCAAATCGCTCTATCTTGCTCGAGGAAGACCGCGTCAAAACCGAAACGGAGCGTGCCAAGGCGCCGGTGGATTTCACTACGCTGCAGCTTCACAACCTCATGTACGAGAAAAACCACTATGTTAAGGCGATAAAGGCCTGCAAAGACTTCAAATCGAAATATCCTGACATTGACCTTGTTCCCGAGGAGGAGTTTTTCCGCGACGCTCCACAAGATATCAAGGACTCCGTTTTGTCGAATGACGCGGCGCACAATCTCATGCTCCGGAGGCTCAATTTCGAGTTATTTCAGCGTAAAGAACTCTGCAAACTTCATGAGAAGCTGGAACTGCAGAAGAAAATCCTCTTGCAGACTATTGCAAACCGAAAGAAGTTCCTGACAAGTCTCCCATCACATCTCAAATCACTTAAGAAGGCCTCCTTGCCTGTACAAAACCAACTCGGGCTTCATCATACTAAGAGATTAAAGCAGCATCATTCTGCAGAGTTACTTCCTCCGGCCCTGTACGTGATTTACTCACAGTTGTTGGCTCAAAAGGAGGCCTTTGGAGAACCAATTGATCTGGAGATTATAGGAAGCCTGAAAGATGCTCAAGCTTTTGCTCGTCAACAGGCTCACAAGGACAATGACAATTCCACTACAGTGGAGAGTTCCAAATTGGAAGACGATGCTCCTGATGAAGAAGAAGATGGTCAGAGACGGAGGAAAAGGCCACGAAGGGTTCAAGCAAAGGAGAGCCTTGACCAGGGGGGAATATTTCAAGTTCATCCACTTAAAATCATTATCTATGTGTATGAAGATCAGCATTCTGATTCAAAATCTTCCAAACTTATTACCCTAAGGTTTGAGTATTTGGTGAAGTTGAACGTTGTATGTGTTGGAATAGAAGGTTCTAATGAAGGTCCGGAGAACGATATCTTATGTAATTTATTCCCTAATGATACGGGACTTGAGCTTCCCCAGCAGTCTGCCAAACTCTTTGTTCAAGAAGCTATAGCATTCAATACTTTAAGAACTTCACGTCCTTACAAATGGGCTCAGCACCTGGCGGGGATTGAATTCTTGCCTGAGGTGTCTCCCTTACTTCTTACTGACGACAGTGGAGCAGTGAAGAATGAAAATATTATATCTGGTCTTTCACTATATCGTCAGCAGAACCGAGTATCGACGGTTCTGAAGAGGATTCGTGATAGAAGAAAAGCTCAATTGGCTCTTCTGGAACAGCTAGAATCTCTCGCAAAGCTTGACTGGCCTCGTTTGTCCTGCAGTAGTGTTCCTTGGGCTTTTCACACTCCGTTGTGCAATTTGGATAGTTGGTCACCAGTAAGACTTCCACCTGTACCTAGAGAGTCCTCATCTCCTGCTGTCATCGATGAAGAGGAGCATGTACAGGAACCAATGGATGCTGATGTAAATGAACGTTCTGATGTCACAAAAACAGAACCTGAGAGTATCACAGAAGATGGGGAGCTTCCAACTTTGCTTCCTAACATGTCCAAGCTTGACCATTCCACACAGCTGAACTTAATTTCTAAAAGTATCATTCCTCCACTCAATAAAATCAGGTCACACAGTTTCAAAAAGTTTGATGACAGTTCTGATTTCTTGCTGGATACTGAAAGTGACATAGATGAACCAGCGCAGACTGAACTAGAACATGAAAATACATTATCCAATTACCATGACAGAAATTCTGTGTCATGGATGGATCATGGGCTCAAGGAATTTTGTTTGGTTCTTTGCAGAAAAATCAGTGCAGATGAGAACAATGTGAATTTAGAAGCTAAGATAAAGATCAGTATGGAATATCCTCTAAGGCCTCCTCTTTTTGCATTGAGCGTTCGCTGTATATCTTCTGGGGAAAAGCGTGATAAGTTAGGATTAGAGTGGTACAATGAACTCCGTGCAATGGAAGCAGAGGTCAATCTACACATACTGAGGATGCTACCTGTCAATCAACAAAATTATGTACTCGCTCATCAAGTTAGTTGTCTTGCCATGTTGTTCGACTATTATTTGGATGAGGCATTCCCATCGTCTGAAAGGACAAATTGTACTTCCGTGGTTGATGTTGGCTTATGTAAGCCTGTTACTGGTCGATTCCTGGGTAGATGTTTTAGAGGAAGGGACCGCAGGAAGATGATCTCCTGGAAAGACATGAAACTCAATTCCAGCTGTCCCTAA 2415 0.4377 MEDGEIEEGSIGGVEEEEHSSEPHKSEESPYEMLRNSKASVENIVADILSIKKDRKPKQHLQDLATQMFLHFITLRQANRSILLEEDRVKTETERAKAPVDFTTLQLHNLMYEKNHYVKAIKACKDFKSKYPDIDLVPEEEFFRDAPQDIKDSVLSNDAAHNLMLRRLNFELFQRKELCKLHEKLELQKKILLQTIANRKKFLTSLPSHLKSLKKASLPVQNQLGLHHTKRLKQHHSAELLPPALYVIYSQLLAQKEAFGEPIDLEIIGSLKDAQAFARQQAHKDNDNSTTVESSKLEDDAPDEEEDGQRRRKRPRRVQAKESLDQGGIFQVHPLKIIIYVYEDQHSDSKSSKLITLRFEYLVKLNVVCVGIEGSNEGPENDILCNLFPNDTGLELPQQSAKLFVQEAIAFNTLRTSRPYKWAQHLAGIEFLPEVSPLLLTDDSGAVKNENIISGLSLYRQQNRVSTVLKRIRDRRKAQLALLEQLESLAKLDWPRLSCSSVPWAFHTPLCNLDSWSPVRLPPVPRESSSPAVIDEEEHVQEPMDADVNERSDVTKTEPESITEDGELPTLLPNMSKLDHSTQLNLISKSIIPPLNKIRSHSFKKFDDSSDFLLDTESDIDEPAQTELEHENTLSNYHDRNSVSWMDHGLKEFCLVLCRKISADENNVNLEAKIKISMEYPLRPPLFALSVRCISSGEKRDKLGLEWYNELRAMEAEVNLHILRMLPVNQQNYVLAHQVSCLAMLFDYYLDEAFPSSERTNCTSVVDVGLCKPVTGRFLGRCFRGRDRRKMISWKDMKLNSSCP* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1506 804 MobiDBLite consensus disorder prediction 279 322 - -
Vra5g1506 804 Pfam Fms-interacting protein/Thoc5 74 431 IPR019163 -
Vra5g1506 804 MobiDBLite consensus disorder prediction 13 32 - -
Vra5g1506 804 MobiDBLite consensus disorder prediction 538 570 - -
Vra5g1506 804 MobiDBLite consensus disorder prediction 305 321 - -
Vra5g1506 804 MobiDBLite consensus disorder prediction 538 563 - -
Vra5g1506 804 Coils Coil 469 489 - -
Vra5g1506 804 MobiDBLite consensus disorder prediction 1 34 - -
Vra5g1506 804 PANTHER FMS INTERACTING PROTEIN 17 798 IPR019163 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1506 Vra-Chr5 21753823 21759519 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1506 5 21753823 21759519 Vra5g1506 5 21753823 21759519 ECH
Vra6g1859 6 35209121 35212544 Vra5g1506 5 21753823 21759519 PCT