Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1491 ATGAGGCAGTGGATACACGTCGCGGTGGCCGCAGCCGCCGTGGGATGCGTCTCCACTCTTATGTTGGTCTTTCTCTTCCGTTGGTGTCGCAAAAGAAATGGCACGACTTTCGTTGAACCGACTAGTTTGACCAGGGTTGAGAGTATGCAGGGAGGGATTTCAGTTTCCAGGATCCATCAGCAACCTTTCCAGATGGATCAGGGGAGCAAGAACAGCAACAAGGGTAATTACAATTACTATGTTTTTCGCGGCGGTGGGGTGTCGGGGAAAAGAAGCGTCTTCAATTGGGGTGATCATCCATCCATGGCTTCTGATGCTGTTGAAAATGGATGGTCACGATTTGCCTTCACGGGGTACAAGAGTTACACGCCGTCTCCTTCGAAAAGATCGGGACTTTTGGGAGCGTGTGCTGCACCGGGAGGGAGTGATTTTGGGAGAGAATCAGAGGCTGAGATAAGCTGGGAAGTGGCACGTGGATCTGCTGAGTTTATGCAGAAGGTGAGGTTGAATCCTGGTATAAAAAAGTCTCATCAAAGCAACAACAATAACGGTTCTCTTGGGGTTGCTTCTATCATTAGAGGGGCTTTGCCTTTGCCTGGGCCTCCCCTGGGGAATTGTGCGTTCCCACAAGAAGCATATTTTGAGATTACCATTTTGTACTCACGTGGCGATGAGTGTGAATCTGTTGGGAAGAATGGGGAAGGTGAGAAGACCAAGCTTTTGGTTCAAGGGAACTCCAATGGAAAAGGGAATTCCGAGGCTCTGGTTCATGTTACCAATGGGAATGGAAGTAATAAAATCAACAATGTCGAAGGAGAGAGTGGGAAGGGTGAATCTGTGATGTTCTCGTTGGGGTTAACAACAGGGGGTTCTGTTCCTTTGAGAGTCCCCGGTAGCTATCCCGGGAGCATTGGCTTCAACTCCAACGGTTCTCTCTATCTTGATGGAATGAAACTTGTACGTGAATCGGAGAAGGCAGAGTGGGTGGGAACTGATAAAGTGATTGGTTGTGGATTCGATCCAAGGCAGAAGAAGGTTTTCTTCACAATAGACTCTGATCTGATGCATGTAATCCACTGCCAGACAGAGGAGTTTGGCACACCACTTTTTCCGATCATGGCTGCAAATATAGACATTATGGTGTTAGTTAATTTTGGACAAAGTGCATTCAAATATGCACCTGCGAATGCCCAGAGAACACCAAATCCATGCTTCATAGCCCCACTTGTAAATTCCCCTGCAGCTACCTTGGGCTACGATGACAGCAAGGAGCTATTCTCAATGGGAAGGATCGATTCTCAGTGGCTCAATCGGTCCACAACCAAAGGAAGCCACAATAATAATAATAATAATAATAATAATAATAACCATAACAACAATCGAACATTGGATTTTGACGAGGAGTCTGAGGCTGATCTGTTTGAAATCGTCATAGATGGTTCTGGAAAATATCCGAACGCAGGATCATAG 1470 0.466 MRQWIHVAVAAAAVGCVSTLMLVFLFRWCRKRNGTTFVEPTSLTRVESMQGGISVSRIHQQPFQMDQGSKNSNKGNYNYYVFRGGGVSGKRSVFNWGDHPSMASDAVENGWSRFAFTGYKSYTPSPSKRSGLLGACAAPGGSDFGRESEAEISWEVARGSAEFMQKVRLNPGIKKSHQSNNNNGSLGVASIIRGALPLPGPPLGNCAFPQEAYFEITILYSRGDECESVGKNGEGEKTKLLVQGNSNGKGNSEALVHVTNGNGSNKINNVEGESGKGESVMFSLGLTTGGSVPLRVPGSYPGSIGFNSNGSLYLDGMKLVRESEKAEWVGTDKVIGCGFDPRQKKVFFTIDSDLMHVIHCQTEEFGTPLFPIMAANIDIMVLVNFGQSAFKYAPANAQRTPNPCFIAPLVNSPAATLGYDDSKELFSMGRIDSQWLNRSTTKGSHNNNNNNNNNNNHNNNRTLDFDEESEADLFEIVIDGSGKYPNAGS* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1491 489 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Vra5g1491 489 MobiDBLite consensus disorder prediction 438 460 - -
Vra5g1491 489 PANTHER SPLA/RYANODINE RECEPTOR (SPRY) DOMAIN PROTEIN 2 484 - -
Vra5g1491 489 PANTHER RAN BINDING PROTEIN 9-RELATED 2 484 - -
Vra5g1491 489 Pfam SPRY domain 213 387 IPR003877 GO:0005515
Vra5g1491 489 Gene3D - 173 400 IPR043136 -
Vra5g1491 489 MobiDBLite consensus disorder prediction 438 463 - -
Vra5g1491 489 SUPERFAMILY Concanavalin A-like lectins/glucanases 283 392 IPR013320 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1491 Vra-Chr5 21584766 21587643 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1491 5 21584766 21587643 Vra5g1491 5 21584766 21587643 ECH
Vra6g1842 6 35017839 35020865 Vra5g1491 5 21584766 21587643 PCT