Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1485 ATGGCTGCTCCTCTTCTTCTCAGACAGGCTCTCCTCCTTCGTTGTGGAGACCAGAAAGGAGTTGTGCAGGTAGTTTGTTTCCATAACTACCAAAGCTTCACCGCCGGAGCTATCGCGGCGCGTTACAGGCCGTTGTGCAGCGCCACCGCCAACTTATCGTCGGACGAAGCCGATGAGAAAACAAAATCTAGCGGCATTAGCAACAACTCCTTTGTGCGGAAAGCTCAGTTCCCGTCAAGTCAGTCGCGGTGGGAGGATGACCCCGATTACCGGAAGTGGAAGGACAAAAAAGAGGAGATTCTGAGGGACATCGAGCCTATCATTATGCTCGCCAAGGACATTCTCCACTCCGGAAGGTACATGGACGGAGCGCGATTGAATATGGAAGACCAGAAAGCGGTTGTTGAGAAGCTTCTTGCGTACCATCCACAGTCTGAAGATAAGGTTGGATGCGGCCTTGAATCCATTATGGTTGACCGCCATCCCCAATATCGACAGTCAAGGTGTCTTTTTATAGTAAGAACTGACGGTGGCTGGGTTGATTTCTCCTATCAGAAGTGCCTTCGCGAATACATTAGAGGTTTGAAAGTTTGA 594 0.5017 MAAPLLLRQALLLRCGDQKGVVQVVCFHNYQSFTAGAIAARYRPLCSATANLSSDEADEKTKSSGISNNSFVRKAQFPSSQSRWEDDPDYRKWKDKKEEILRDIEPIIMLAKDILHSGRYMDGARLNMEDQKAVVEKLLAYHPQSEDKVGCGLESIMVDRHPQYRQSRCLFIVRTDGGWVDFSYQKCLREYIRGLKV* 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1485 197 Gene3D - 98 193 - -
Vra5g1485 197 Pfam Protein of unknown function (DUF3223) 112 188 - -
Vra5g1485 197 PANTHER - 1 193 IPR044673 -
Vra5g1485 197 PANTHER DCL PROTEIN (DUF3223) 1 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1485 Vra-Chr5 21522551 21530242 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1485 5 21522551 21530242 Vra5g1485 5 21522551 21530242 ECH
Vra6g1833 6 34849191 34854944 Vra5g1485 5 21522551 21530242 PCT