Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1483 ATGGGGGGCTGGGCATTAGCGGTGCATGGTGGCGCAGGTGTGGATCCTAATCTCCCACCGCACCGTCAGGAGCAAGCCAAACAACTCCTTACTCGCTGTCTTAATCTTGGCATCTCTGCCCTTCGTTCCAATGCTTCCGCCATCGACGTTGTCGAACTTGTCGTACGGGAACTGGAAACGGATCCCCTGTTTAACTCGGGTCGAGGATCCGCCCTGACAGAAAAGGGAACAGTGGAAATGGAGGCAAGTATCATGGATGGTTCCAAGAGACGATGCGGCGCCGTTTCGGGCCTCACCACCGTCAAAAACCCCATCTCACTCGCTCGCCTTGTCATGGACAAGTCTCCACATTCCTACCTCGCCTTTAATGGCGCTGAAGAATTCGCCAGACAACAGGGTGTGGAGGTAGTGGAGAACGAATACTTCATTACTCCTGAAAATGTCGGAATGCTGAAACTGGCAAAGGAGGCAAACACAATCCTGTTTGATTATCGGATTCCAACGGCTGGATACGATAGTTGCGGTGTGGGGGCCGAGAGTCCGTTGCAGATGAATGGACTGCCAATAAGCGTGTACGCGCCGGAGACGGTGGGGTGTGTGGTGGTGGACAAGGAAGGGAGGTGTGCGGCTGCGACGTCGACAGGGGGCTTGATGAACAAGAAGAGTGGAAGAATCGGTGACTCGCCTCTGATAGGTGCAGGGACTTACGCTTGTGGAGTGTGTGGGGTTTCGTGCACTGGGGAAGGTGAGGCTATCATACGAGGCACGCTGGCGCGTGAGGTGGCAGCAGTGATGGAATACAAAGGACTGTCACTGCAGCAGGCTGTGGACTTTGTGATCAAGCACCGCCTGGACGAAGGGAAAGCAGGGCTGATCGCCGTCTCAAATACCGGTGACGTCGCTTATGGCTTCAACTGTAACGCCATGTTCAGGGGCTGCGCCACCGAGGACGGATTCATGGAGGTCGGAATCTGGGACTAG 981 0.5535 MGGWALAVHGGAGVDPNLPPHRQEQAKQLLTRCLNLGISALRSNASAIDVVELVVRELETDPLFNSGRGSALTEKGTVEMEASIMDGSKRRCGAVSGLTTVKNPISLARLVMDKSPHSYLAFNGAEEFARQQGVEVVENEYFITPENVGMLKLAKEANTILFDYRIPTAGYDSCGVGAESPLQMNGLPISVYAPETVGCVVVDKEGRCAAATSTGGLMNKKSGRIGDSPLIGAGTYACGVCGVSCTGEGEAIIRGTLAREVAAVMEYKGLSLQQAVDFVIKHRLDEGKAGLIAVSNTGDVAYGFNCNAMFRGCATEDGFMEVGIWD* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1483 326 CDD Asparaginase_2 5 318 - -
Vra5g1483 326 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 4 323 IPR029055 -
Vra5g1483 326 PANTHER L-ASPARAGINASE 1 326 IPR000246 GO:0016787
Vra5g1483 326 Pfam Asparaginase 4 325 IPR000246 GO:0016787
Vra5g1483 326 PANTHER PEPTIDASE T2, ASPARAGINASE 2, NUCLEOPHILE AMINOHYDROLASE-RELATED 1 326 - -
Vra5g1483 326 Gene3D (Glycosyl)asparaginase 196 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1483 Vra-Chr5 21492177 21494359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1483 6 275 Miscellaneous Gene Families AT4G00590 29.010 1.45e-16 77.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1483 5 21492177 21494359 Vra5g1483 5 21492177 21494359 ECH
Vra6g1830 6 34791775 34793727 Vra5g1483 5 21492177 21494359 PCT