Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1461 ATGGCGTCCAGTTTTGATCGATGGGAAAAAGATCCTTTCTTTAGTGCTGCAGAAGAAGTTCAGGAATCTTCTGACAGGATGGAATCTATCTATAGAACATGGATTCACGCAATGAAGGATGCATCCAGCCTTTGGAACTGTGATGAAGCTCGCCGAGATCTACAATCTGCCATTGGCACTGCTAAATGGCAGTTAGAGGAATTTGAACGGGCTACTCGGTCAAGTTATAGCAAAGTTTCAACCGAGGATGCGAGAAATAGACACCGAGATTTTGTTGATGCCATCCGTGAAAAGATCAGCAACGTTGAAAATTTGTTACTAAAACCTGTTCATTCAGGTAGCAAGGCATCTCTGCCTTGGCCACGTCTGGATGAAGGAGAATGTGATGAACTCGCATCATTTCTTTCGGGAACATCGGCTGCTGTTTGCAAAAATCCTGTGAAATGTACCAGCAGAGATGGTGAAAATGTGCAGTTAAGTGACAAAGATTCTATCCCTAATTGTTCAAGCAATTTACATGTTTCATCTGGGTGGGGTTCGTCTGATGCAGCACAAGAAAAGTCACTTGGGCATCGCAGGGCAGCTAGTGCTGATCCTGACATTGGTTATTGGCAAATCACTGTTTCTGATGGTGTGCAAGAATCGAATTCCTCCAATGGTTCTTCCAGTCTAAATCCTGTGCACAAGGTAGCAAGTCTCTCTGGATTTTTTGGTTCCGTGGAAACTATCTCTAAGTTGAAGTGGCCTAAGAATGGTTATAGAAAGCTGAAACCAGTGAATCATCGTGAAGAAACGGATAATGCACTATTACCATCAGTTGGATTGAATGGGGGCATCAATGCATACTATGAAGAAAGTAAGATTTGCCTTGATAATTATGATGAATCTTATGATAAGCAACTCCACGGGTGGTACGGGGCTTTGCAAAGGCAGCTTCAAAGATCTCAGTACCAAATGCAATACAATCGGCATGTTCAAATAACTATCTGGGCTGTTATTCTCCTCTGCTTTATTGTTTTTATAGCTTTTTGCACGATGTAG 1041 0.4236 MASSFDRWEKDPFFSAAEEVQESSDRMESIYRTWIHAMKDASSLWNCDEARRDLQSAIGTAKWQLEEFERATRSSYSKVSTEDARNRHRDFVDAIREKISNVENLLLKPVHSGSKASLPWPRLDEGECDELASFLSGTSAAVCKNPVKCTSRDGENVQLSDKDSIPNCSSNLHVSSGWGSSDAAQEKSLGHRRAASADPDIGYWQITVSDGVQESNSSNGSSSLNPVHKVASLSGFFGSVETISKLKWPKNGYRKLKPVNHREETDNALLPSVGLNGGINAYYEESKICLDNYDESYDKQLHGWYGALQRQLQRSQYQMQYNRHVQITIWAVILLCFIVFIAFCTM* 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1461 346 PANTHER OS05G0443700 PROTEIN 1 345 - -
Vra5g1461 346 MobiDBLite consensus disorder prediction 175 194 - -
Vra5g1461 346 Pfam Syntaxin 6, N-terminal 11 103 IPR015260 GO:0016020|GO:0048193
Vra5g1461 346 SUPERFAMILY t-snare proteins 10 104 IPR010989 GO:0016020|GO:0016192
Vra5g1461 346 PANTHER EXPRESSED PROTEIN 1 345 - -
Vra5g1461 346 Gene3D - 9 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1461 Vra-Chr5 21307485 21310628 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1461 5 21307485 21310628 Vra5g1461 5 21307485 21310628 ECH
Vra6g1821 6 34675681 34678350 Vra5g1461 5 21307485 21310628 PCT