Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1459 ATGGTGGAGCGAGAGCAAGGTGACAAGATCAATATGCTGATGTTCAAGTCCCTTCTGATTTCTTTGTTGCTGGTTTTCTGTGGCAGACACACCGTAGCAGAAAAGAAAACCAAACACCACTCTAAAAGCACATACATAATTCACATGGACAAATTCAACATGCCTTCAAGCTTCAATGACCATCTCCTCTGGTATGATTCGTCACTGAAATCAGTGTCAGACTCAGCAGAGATGCTATACACATACCAACATGTAGCTCATGGCTTCTCCACAAGGCTAACTAGCCAAGAAGCAGAGTTACTCTCAAAGCAACCGGGAATTCTCTCTGTCATCCCTGAAGTTAGATACGATCTTCACACAACTCGAACACCAGAGTTTCTGGGGTTGGGGAAAGCCATCACTTTTTCACTGACTTCTGGAAAACAAAGCGATGTGGTTGTTGGAGTGCTGGACACTGGTGTGTGGCCCGAGCTAAAAAGCTTCGATGACAAGGGTCTTGGGCCAGTTCCAAATAGCTGGAAAGGTGAGTGTGAGAGAGGTAAGAACTTCAACCCATCAAACTGCAACAAGAAGCTGATTGGTGCAAGGTTTTTCGCCAAGGGCTATGAGGCGGCGTTTGGACCCATCAATGAAAGTACAGAATCAAAGTCACCAAGGGATGATGATGGCCATGGAACTCACACCTCAACAACAGCAGCAGGCTCTGTAGTTGCAGGAGCTAGCCTCTTCGGCTTTGCTAATGGGACAGCAAGAGGAATGGCCACACAAGCCAGAGTTGCTACATACAAAGTGTGTTGGCTTGGAGGGTGCTTTTCATCAGACATAGCTGCTGGTATTGACAAGGCCATTGCAGATGGTGTTAACATCCTTTCCATGTCAATTGGGGGAGGTTTGACGGATTACTACAGAGACACTATTGCGATTGGAACCTTTGCTGCCACAGCCCACGGAATACTGGTTTCCACTTCAGCAGGAAATGGTGGGCCTAGTCAAGCATCTTTGTCTAATGTGGCACCATGGTTAACCACAGTGGGTGCTGGAACTATAGACCGTGACTTCCCTGCCTATGTCACTCTTGGAAATGGGAAGTCATACACTGGGGTGTCCCTTTACAATGGCAAACTCCCACCTAAGACTCCAATTCCAATTGTGTATGCCGGTAATGTAAGCGGTGATTCAGAAGGAAGTCAGTGCAGCAAAGGTAGTTTGATTGCTGCAAAAGTAGCAGGAAAAATCGTGATTTGTGACAGAGGAGGGAATCCAAGGGTAGAAAAGGGTCTGGTGGTGAAGAGTGCTGGAGGCATTGGGATGATACTAGCAAACAATGAAGATTACGGGGAAGAGTTAATAGCTGACTCTTATCTCCTTCCCGCACTAGCTTTGGGCCAGAAATCCAGCAATGAGATAAAGAAGTATGTTTTCTCATCTCCCAATCCCACAGCTAAACTTTTGTTTGGTGGCACCCAGTTAGGGGTTCAACCATCTCCAGTGGTGGCAGCTTTCAGCTCAAGAGGGCCAAATTTGCTGACACCAAAGGTGCTCAAACCAGACCTGATAGCTCCAGGAGTTAACATCCTAGCTGGATGGACTGGTGCAGTTGGACCAACTGGTATGACTGAAGACACAAGGCATGTGGAATTCAACATCATCTCAGGCACATCCATGTCCTGCCCCCATGTCAGTGGGTTAGCTGCCCTTCTTAAGGGCACTCACCCAGAATGGAGCCCTGCAGCTATAAGGTCTGCCCTCATGACCACATCTTACAGAACCTACAAAAATGGGCAAACCTTAAAAGATGTTGACAATGGCCTACCAGCTACACCGTTTGATTTTGGGGCTGGACATGTAGATCCAGTGGCTGCTTTTGATCCTGGCCTTGTCTATGATGCCACCGTGGATGACTACTTGAGCTTCTTCTGTGCCCTGAAATACAGTTCCTATCAGATAAAGCTTGTTGCAAGGAGAGATTTTACTTGCAGCAAAAGTAAGAAGTACAGAGTGGAAGATCTCAACTACCCATCTTTTGCTGTTCCTTTTAACACGGCTTTTGGAGTAAAGGGTGGTTCTCAAAAACCAACCACTGTTCAGTACACAAGGACTTTAACCAACGTGGGTGCCCCAGCAACGTATACAGTTTCAGTGACGCAGTCTCCCTCGGTGAAGATTGTGGTTCAACCACAAACACTTAGTTTCCGTGAACTAAATGAGAAGAAGAGCTATACAGTTACGTTCACGTCTTCTTCAAAGCCTTCGGGAACAACCAGTTTTGCTTATCTAGAATGGTCTGATGGGAAACACAAGGTTTCTAGTCCCATTGCTTTCAGCTGGACTTGA 2334 0.4662 MVEREQGDKINMLMFKSLLISLLLVFCGRHTVAEKKTKHHSKSTYIIHMDKFNMPSSFNDHLLWYDSSLKSVSDSAEMLYTYQHVAHGFSTRLTSQEAELLSKQPGILSVIPEVRYDLHTTRTPEFLGLGKAITFSLTSGKQSDVVVGVLDTGVWPELKSFDDKGLGPVPNSWKGECERGKNFNPSNCNKKLIGARFFAKGYEAAFGPINESTESKSPRDDDGHGTHTSTTAAGSVVAGASLFGFANGTARGMATQARVATYKVCWLGGCFSSDIAAGIDKAIADGVNILSMSIGGGLTDYYRDTIAIGTFAATAHGILVSTSAGNGGPSQASLSNVAPWLTTVGAGTIDRDFPAYVTLGNGKSYTGVSLYNGKLPPKTPIPIVYAGNVSGDSEGSQCSKGSLIAAKVAGKIVICDRGGNPRVEKGLVVKSAGGIGMILANNEDYGEELIADSYLLPALALGQKSSNEIKKYVFSSPNPTAKLLFGGTQLGVQPSPVVAAFSSRGPNLLTPKVLKPDLIAPGVNILAGWTGAVGPTGMTEDTRHVEFNIISGTSMSCPHVSGLAALLKGTHPEWSPAAIRSALMTTSYRTYKNGQTLKDVDNGLPATPFDFGAGHVDPVAAFDPGLVYDATVDDYLSFFCALKYSSYQIKLVARRDFTCSKSKKYRVEDLNYPSFAVPFNTAFGVKGGSQKPTTVQYTRTLTNVGAPATYTVSVTQSPSVKIVVQPQTLSFRELNEKKSYTVTFTSSSKPSGTTSFAYLEWSDGKHKVSSPIAFSWT* 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1459 777 Pfam Fibronectin type-III domain 669 773 IPR041469 -
Vra5g1459 777 PRINTS Subtilisin serine protease family (S8) signature 142 161 IPR015500 -
Vra5g1459 777 PRINTS Subtilisin serine protease family (S8) signature 220 233 IPR015500 -
Vra5g1459 777 PRINTS Subtilisin serine protease family (S8) signature 551 567 IPR015500 -
Vra5g1459 777 Pfam PA domain 383 467 IPR003137 -
Vra5g1459 777 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 31 775 IPR045051 -
Vra5g1459 777 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 28 119 IPR037045 -
Vra5g1459 777 Gene3D - 639 776 - -
Vra5g1459 777 CDD Peptidases_S8_3 116 588 IPR034197 -
Vra5g1459 777 Gene3D - 350 491 - -
Vra5g1459 777 ProSiteProfiles Serine proteases, subtilase domain profile. 115 622 - -
Vra5g1459 777 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 31 775 - -
Vra5g1459 777 Pfam Subtilase family 143 614 IPR000209 GO:0006508|GO:0008236
Vra5g1459 777 MobiDBLite consensus disorder prediction 209 231 - -
Vra5g1459 777 Pfam Peptidase inhibitor I9 44 119 IPR010259 -
Vra5g1459 777 SUPERFAMILY Subtilisin-like 118 626 IPR036852 GO:0004252|GO:0006508
Vra5g1459 777 ProSitePatterns Serine proteases, subtilase family, serine active site. 552 562 IPR023828 -
Vra5g1459 777 CDD PA_subtilisin_like 356 483 - -
Vra5g1459 777 SUPERFAMILY PA domain 405 445 IPR046450 -
Vra5g1459 777 Gene3D Peptidase S8/S53 domain 144 635 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1459 Vra-Chr5 21295336 21298036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra5g1459 11 777 Subtilisin-like Serine Gene Family AT5G67360 64.026 0.0 1005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1459 5 21295336 21298036 Vra5g1459 5 21295336 21298036 ECH
Vra6g1820 6 34672830 34675448 Vra5g1459 5 21295336 21298036 PCT