Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1458 ATGCCAGAAGCTGCAATCTCCACGCCCAAAAAACTCGCGCCTCGTTACACCTCATCCTCCTCCTCCTCGTCTCCTCGCTCGCCGTCGCCATTCACGCCCAAACGATCACAGTCGGTGGAGCGAAGACGACCCGCCACTGCTGGCACCACCCGCACGACGTCCTCCTCGTCTGCCAAAATGCTTCCAACTTCCGCGATAACAAGAAGCCTATCCGTGTCTTTTCAGGGGGAGTCGTTCTGGATCACCGTCAACAAAGCCAAACCGACAACCAACGTCGTTTCCTCTCCCAAACTCGTCGCGCCGAGAAAATCGCCGTTGGACGGCGCATCGTCTCCGCGAGGAGTTATAAATAGCAGAGGCCAGGTTTCTTTTATTCGTCCTGCTTCACCGAACAAGGTTTCTAATGCAGTGCCAGCCTCTTCTTCTTCTTCTTCCAGAGGTGTGAGCCCCCTGAGGCTCGGAAACGGAGCGTCCTATAACGAGCCTTCTGTTTTGAGTTTTGCCGTTGATGTTAAGAGAGGGAGGGTGGGAGAGAACCGAATTGTGGAGGCGCATTCGCTGAGGCTTCTCCATAACCGCCTCTTGCAGTGGCGTTTTGTCAACGCCAGAGCAGATTCTGATCTCTCTGCACGGAAATCCAATGCCGAGAATTGTCTCTATGATGCTTGGGCATCTACCACCAAACTACGAGAATCTGTGAGCTCTAAAAGGAGAGAGCTACAATTACTGAAGCATAAATTGAAGCTGGTTTTCATTCTCAAAAAGCAAATGGTTTATTTGGAAGATTGGGCTATTTTGGATGAAGTTTACATAAGTTCACTTGCCGGAGCTATTGAAGCATTAAAGGGCAGCACTCTCCGGCTCCCTGTTGTTGATGGGGCCAAGGCAGATGTACATAAAGTGAAGGATGCTGTTTGTTCAGCTGTGGATATAATGAAGGCCATGGGATCCTCCGTATGCTTTTTGTTACCGAAGGTTGGATATTTAAATTCATTGGTGGTCGAAGTTGCCAACTTGATTACAAAAGAGCATGTTTTGCTTGATGAGTGCAGACACCATTTAGCGATGGTAACAACCATGCAGGTTAGAGAGTGTAGCCTTAGAACGCATATTTCACAACTGAAGCTCAACGTCGAAAATAACAAAGCAGAAAACTGTATGTATGACCAAGCTCACATTCATTGTTAA 1188 0.4848 MPEAAISTPKKLAPRYTSSSSSSSPRSPSPFTPKRSQSVERRRPATAGTTRTTSSSSAKMLPTSAITRSLSVSFQGESFWITVNKAKPTTNVVSSPKLVAPRKSPLDGASSPRGVINSRGQVSFIRPASPNKVSNAVPASSSSSSRGVSPLRLGNGASYNEPSVLSFAVDVKRGRVGENRIVEAHSLRLLHNRLLQWRFVNARADSDLSARKSNAENCLYDAWASTTKLRESVSSKRRELQLLKHKLKLVFILKKQMVYLEDWAILDEVYISSLAGAIEALKGSTLRLPVVDGAKADVHKVKDAVCSAVDIMKAMGSSVCFLLPKVGYLNSLVVEVANLITKEHVLLDECRHHLAMVTTMQVRECSLRTHISQLKLNVENNKAENCMYDQAHIHC* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1458 395 PANTHER AUGMIN FAMILY MEMBER 93 376 - -
Vra5g1458 395 PANTHER AUGMIN FAMILY MEMBER 12 89 - -
Vra5g1458 395 PANTHER QWRF MOTIF-CONTAINING PROTEIN 9 93 376 - -
Vra5g1458 395 PANTHER QWRF MOTIF-CONTAINING PROTEIN 9 12 89 - -
Vra5g1458 395 MobiDBLite consensus disorder prediction 12 35 - -
Vra5g1458 395 MobiDBLite consensus disorder prediction 114 149 - -
Vra5g1458 395 MobiDBLite consensus disorder prediction 94 149 - -
Vra5g1458 395 MobiDBLite consensus disorder prediction 42 61 - -
Vra5g1458 395 Pfam QWRF family 20 348 IPR007573 -
Vra5g1458 395 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1458 Vra-Chr5 21283947 21286793 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra5g1458 5 21283947 21286793 Vra5g1458 5 21283947 21286793 ECH
Vra6g1814 6 34611947 34617248 Vra5g1458 5 21283947 21286793 PCT