Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1454 ATGAAAAACATAACAACCTTCACTTCGAAGACGACAACAATGGACCCCAGAATCTGGAGCAAACTACCTCCTGATGTTGTGGAACACATACTTCTGTTACTCCCTCTCAAGACTCTCTTGAATCTCAGACCCACTTGCAAGGCCTTCTCCTCTCTTCTCTTCTCTCCTTCCTTTGTCTCCAAACATTCCTCGTCATCTTCTTCTTCTTCTTCTTCTTCTTCTTCACCCTTCTCTTCCTTTCTCTTACTCTCACACCCTCAGTGTCCTCTCTACTTCCGTCTCTACGATTCCAACCTTTCTTCTTGGCGCACTGTCTCTCCCTCTCTCCCTTTCTCTTCATCCTTCTCTCTTGCATCCTCCTCCGGTGGCCTCTTCTGTCTCCTCAACCCCTCTTCCTCTTCCTTTCTCGTATGCAACCTTTTTGCCAAATCCTCCAGAACCATCCAATCCCCAATTCACTCTCTTCACTTCACCCACCTTTCTTTTCTCGCCACCCCTCTTACCTACTACTTAGTGCTCCTTTCTTCAAGCTCAACCTCCAACACCGCCTTTGTCTACAACTCCAACCACCACTCCTGGAGGCGCTTCCAGGGGTTCCATGCTGTCCTCAGTGACAGTTGCCTCCAGCAGGGTACTTTCTTCCACGGCGGCTTGTACTTCACCACTCCGGAACCGTTCTCCGTGGTGCGTTTGGATATGGAGAGTGGCAAGTGGGAGAGACACGTGGCTGAGTTGCCCCCAGAACTGACCTTCGTGAGGCTTGTGAGTGATGAGGAGGGAGAGGGAAAATTGTATTTGGTGGGTGGGATTGGAGCCGATGGGATCTGCAGAAGTATGAAGGTGTGGGAATTAAGGAGTGACGGGGTTTGGGTGGAAGTGGTGGCGTTGCCTGAGATTATGTGTAGAAAATTAGTGTCTGTCTGTTACCATAACTATGAACATGTTTATTGCTTGTGGCATGAGGGTATGATCTGTGTTTGCTGTTACATGTGGCCGGAGATATTGTACTACAGTGTTTCCAGAAGGAGTTGGGATTGGCTTCCAAAATGTCCCTATTTGCCTCTCAAGTGTAGTTCTGGTTTCAAGTGGTTTTCTTTTCTTCCAAAGCTCTATGCTTCCGTCTGA 1125 0.4844 MKNITTFTSKTTTMDPRIWSKLPPDVVEHILLLLPLKTLLNLRPTCKAFSSLLFSPSFVSKHSSSSSSSSSSSSSPFSSFLLLSHPQCPLYFRLYDSNLSSWRTVSPSLPFSSSFSLASSSGGLFCLLNPSSSSFLVCNLFAKSSRTIQSPIHSLHFTHLSFLATPLTYYLVLLSSSSTSNTAFVYNSNHHSWRRFQGFHAVLSDSCLQQGTFFHGGLYFTTPEPFSVVRLDMESGKWERHVAELPPELTFVRLVSDEEGEGKLYLVGGIGADGICRSMKVWELRSDGVWVEVVALPEIMCRKLVSVCYHNYEHVYCLWHEGMICVCCYMWPEILYYSVSRRSWDWLPKCPYLPLKCSSGFKWFSFLPKLYASV* 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1454 374 SMART fbox_2 22 62 IPR001810 GO:0005515
Vra5g1454 374 PANTHER F-BOX/KELCH-REPEAT PROTEIN 18 372 - -
Vra5g1454 374 SUPERFAMILY Kelch motif 90 353 IPR015915 GO:0005515
Vra5g1454 374 ProSiteProfiles F-box domain profile. 16 62 IPR001810 GO:0005515
Vra5g1454 374 Gene3D - 16 61 - -
Vra5g1454 374 PANTHER F-BOX/KELCH-REPEAT PLANT PROTEIN 18 372 - -
Vra5g1454 374 Pfam F-box domain 19 58 IPR001810 GO:0005515
Vra5g1454 374 Gene3D - 127 372 IPR015915 GO:0005515
Vra5g1454 374 SUPERFAMILY F-box domain 14 97 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1454 Vra-Chr5 21256771 21258317 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1808 6 34535059 34536754 Vra5g1454 5 21256771 21258317 PCT