Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra5g1449 ATGGGAAAGCGTAATTCTCAACGTAAAAATGCTGCGATGTTTGATAGTGATGATGATAGTAGCGTGACCTCGTCGTCAACTGCTCGCTCTGATCTCATGTCGGTGTCCGGAGCGGAAGATGTGCAGTTTGTTCAAGATTCCTTGCTCGACCAAGCTCTCGATGCACTAGATGAGAAAAGGGGTTCCACGAGGGAGAAAGCTTTTTCATCGATAATTGACGCTTTCAATAGCAACATGCAGCATCAGTTTGTGGAGAAGAAATTTGCTACGTTGTTACATCAATGCCTTTCTTCAATTAAAAAGGGATCTAAAAAGACATCTGCTAAAGAGATAGCTTTGGCATCTCACGCGATTGGTTGTCTGGCCTTGACTGTTGGATGTGGTGATAATGCCCGTGAAATATTTGAAGAATCCATTCGTCCTTTGGATGAATCTCTCACATCTACAATAGATGTTTCGAAGATACCATCATTGGTGGAGTGTTTGGCTATAATTACCTTTATTGGGGGGAATGATCAAGAAGAAACAGAACGATCAATGGACATAATGTGGCGAGTTATTAATCCCAAATCAGGTTCCAATGTAGTTGCTGTCAAACCTTCTGCTTCATTAATAGCTAACGTGGTGACTGCGTGGTCTTTTCTTCTCTCCACAGTAAGCAATTTGAAGTTAAATTCAAAAAATTGGCAAAATTCAATATCTTATTTATCTGGTCTTCTAGACAAGGAAGACAGATCTGTACGAATTGCTGCTGGTGAAGCACTTGCTCTGATTTTTGAAATTGGAGTTATAGATAAGTTTTCTGCCCAGTCAGACAATGCAAGTGATGCAACGCAAGAAGGGAGTAAACCACTCGAAAGCTACATATTTTTACAGGGACTAAAAGGAAAGGTGTTGAATCAATGCAAAAAACTTTCCATAGAGGCGGGTGGAAAAGGTTCTGCAAAGAAAGATCTTAATAGTCAAAGGAACTTGTTCCGAGATATCTTGGACTTTTTTGAGTATGGTTACTCCCCGGATATTTCAATGAAGATTGGGGGTGATTCCCTGCAGACATCATCGTGGTCTGAAATGATACAGTTGAATTTTATCAAGCATTTTCTTGGAGGAGGATTCGTTAAGCATATGCAGGAAAACGAGTTTCTACATGATGTATTTGGTTTTTCGCCGAAGAGAAAATATCTTAATAACAGCGAACACAAAATGTCTGGTGGTGAAAAGAGAATGTTTAAATCTCCAAATTCGGTTTTGAACAAGGCTAGGACGCAATTACTTAATAAGCAGCGGATATTATCTGAGGGCAGAAACTTCGGCCACTACGCCATCAACCACGAGGATGCATGA 1344 0.4033 MGKRNSQRKNAAMFDSDDDSSVTSSSTARSDLMSVSGAEDVQFVQDSLLDQALDALDEKRGSTREKAFSSIIDAFNSNMQHQFVEKKFATLLHQCLSSIKKGSKKTSAKEIALASHAIGCLALTVGCGDNAREIFEESIRPLDESLTSTIDVSKIPSLVECLAIITFIGGNDQEETERSMDIMWRVINPKSGSNVVAVKPSASLIANVVTAWSFLLSTVSNLKLNSKNWQNSISYLSGLLDKEDRSVRIAAGEALALIFEIGVIDKFSAQSDNASDATQEGSKPLESYIFLQGLKGKVLNQCKKLSIEAGGKGSAKKDLNSQRNLFRDILDFFEYGYSPDISMKIGGDSLQTSSWSEMIQLNFIKHFLGGGFVKHMQENEFLHDVFGFSPKRKYLNNSEHKMSGGEKRMFKSPNSVLNKARTQLLNKQRILSEGRNFGHYAINHEDA* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra5g1449 447 Pfam Interferon-related developmental regulator (IFRD) 24 334 IPR007701 -
Vra5g1449 447 Pfam Interferon-related protein conserved region 379 429 IPR006921 -
Vra5g1449 447 SUPERFAMILY ARM repeat 35 260 IPR016024 -
Vra5g1449 447 MobiDBLite consensus disorder prediction 16 33 - -
Vra5g1449 447 PANTHER INTERFERON-RELATED DEVELOPMENTAL REGULATOR 2-LIKE ISOFORM X1 1 443 - -
Vra5g1449 447 MobiDBLite consensus disorder prediction 1 33 - -
Vra5g1449 447 PANTHER INTERFERON-RELATED DEVELOPMENTAL REGULATOR 1 443 IPR039777 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra5g1449 Vra-Chr5 21191037 21195902 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra6g1803 6 34461355 34466894 Vra5g1449 5 21191037 21195902 PCT