Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g1324 ATGATGAATAGTAAGGAAGTGATGGAAGAAGAAGGAAAATCGTGGAAGAGAGAAATGAGGAAGGAGATAAAGAAGGTGAGAAGAATAGCTGCTCCAATGGTGGTTGCAAGTGTGTTGCAGTATCTTCTACCAGTAGTGTCTCTCATTATGGTTGGCCATCTCAACCAGCTTTCTCTTTCAAGTGTTGCAATTGCAACCTCTCTCACTAATGTTTCTGGTTTTAGTGTACAGTCAGGGATGGCTGGTGGATTGGAAACTTTATGTGGGCAAGCATTTGGAGCAGAACAATATGAAAAATTTGGACTATACACTTACACTGCCATTATATCTCTTTCTTTGGTTTCTGTTCCAATCACTATTCTGTGGATTTTCATGGATAAAATATTGATCCTCTTACAGCAAGATCCAATGATAGCCCTCCAGGCTCGTAAATATGCCCTTTGGCTTATACCTGCTTTGTTTGGTTCTGCAATTCTCAAACCCCTCACACGATTTTTCCAGACCCAGAGTTTGATTTTTCCCATGATTCTAAGCTCTGCTCTAGTTCTATGCTTCCACATAGTAACATGTTGGATCCTAGTGTTTAAATTGGAGTTGGGACATGTTGGCGCCGCAATAGCCTTCAGCTTCTGCGTTTGGTTCAATGTGATGTTGTTGTTGTCTTTTGTGAGGTTTTCCTCAGCTTGTGACAAAACACGTGTCCCTTTCTCCATCAAAGCATTGCTTGGCCTTGGAGAGTACTTTCGCTTTGCTGTCCCTTCAGCAGTCATGGTTTGTCTTAAATGGTGGGCCTGTGAGATACTTGTTCTGCTGGCTGGAGTTTTTCCTAACCCAAAGTTGGAGACATCAGTTCTATCTATATGCTTGACAATCTCCACGTTACATTTCACCATACCCTATGGCTTTGGAGCTGCTGTTAGCACTAGAGTTTCGAATGAACTAGGAGCAGGGAATCCAGGAGCAGTTCGAATGGCTGTTTCTACCACGATGTTGATTGCAGTGACAGAAGGTCTCATTGTATGTGCAGTGCTATACAGTTGCAGACATGTGTTGGGTTATGCCTATAGCGATGACCATGTAGTTGTTCATTACGTGGCTGTTATGACCCCTCTGCTTTGTCTTTCAATTTTTACTGACAGTTTGCAATCAGTTCTTTCAGGGGTTGCTAGAGGAAGTGGGTGGCAACATCTTGGAGTTTATGTGAATCTTGGAGCTTTTTATCTGGTTGGAATTCCTGTGGGTGCCCTACTTGGTTTTGTTGCACATTACAGAGCAAAGGGTCTTTGGATTGGAATAGTCACTGGTTCCATTCTCCAATCCTTTCTCCTTTCCCTTATCACTGCTCTCACAAACTGGAAAAAACAGGCAATGATGGCAAGAGAGAGAATATTTGATGCCACACCACCCAACCAAAATGGATCAAATCGCATCACCAGTGCTTAA 1443 0.4276 MMNSKEVMEEEGKSWKREMRKEIKKVRRIAAPMVVASVLQYLLPVVSLIMVGHLNQLSLSSVAIATSLTNVSGFSVQSGMAGGLETLCGQAFGAEQYEKFGLYTYTAIISLSLVSVPITILWIFMDKILILLQQDPMIALQARKYALWLIPALFGSAILKPLTRFFQTQSLIFPMILSSALVLCFHIVTCWILVFKLELGHVGAAIAFSFCVWFNVMLLLSFVRFSSACDKTRVPFSIKALLGLGEYFRFAVPSAVMVCLKWWACEILVLLAGVFPNPKLETSVLSICLTISTLHFTIPYGFGAAVSTRVSNELGAGNPGAVRMAVSTTMLIAVTEGLIVCAVLYSCRHVLGYAYSDDHVVVHYVAVMTPLLCLSIFTDSLQSVLSGVARGSGWQHLGVYVNLGAFYLVGIPVGALLGFVAHYRAKGLWIGIVTGSILQSFLLSLITALTNWKKQAMMARERIFDATPPNQNGSNRITSA* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g1324 480 Pfam MatE 32 192 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vra4g1324 480 Pfam MatE 253 415 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vra4g1324 480 CDD MATE_eukaryotic 22 456 IPR045069 GO:0042910|GO:1990961
Vra4g1324 480 PANTHER PROTEIN DETOXIFICATION 16 459 - -
Vra4g1324 480 TIGRFAM matE: MATE efflux family protein 32 429 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Vra4g1324 480 PANTHER MULTIDRUG RESISTANCE PROTEIN 16 459 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g1324 Vra-Chr4 20020001 20022729 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g1324 4 20020001 20022729 Vra1g0657 1 7746208 7750870 ECH
Vra4g1324 4 20020001 20022729 Vra4g1324 4 20020001 20022729 ECH