Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0929 ATGGCTTCCCCATCTTCCCCCACTGATTCCAATCCCCCCTCCGCCCTCCCCCTCACTCTCGCCGCCCCTCCCTCCACCTCCTCCCGCCGTCTCCCCCCGCCATGCTGGACCCCGGAGGAAACTTCCGCCCTCATCGACGCCTACCGCGACAAGTGGTACTCCCTCGGCCGCACCAACCTCAAAGCCACCCACTGGCAAGAGGTCGCCGATGCCGTCACTGCCCAGTGCCCCAACGCTTCCCCCACTGCCAAAACCGCCGTCCAGTGTCGCCACAAAATGGAAAAACTCCGCAAACGCTACCGCACCGAAATCCAACGCCTCCGCTCCCTCCCTCTCCCTCGCCTCATCAACAACTCCACCACCGCTTCACCCTCCTCCTGGGTTCACTTCAAATCCATGGATTCCATGGAAAAAGGCCCCAACAAACCCCACACCGACACAACCACCGCCACCAACCCTAACACCCCCACCAACAACCTCAATTTCCCAGACGACGACAACGACGACGATGATCTGTACGAGGAATTCAAGAACGCCCCTGGATCCAACACGCGCAGCCTCAATAAACTCTACAAGAACGGTTTTGGATCCGGATCCGCCTCCGGGTTCCGGATCCGGATCCCGGCCGGGGTGCCAAACCACACCTCTTCGAAATTCTTCAACGCGCCTCCTCCCGGCATGGTGCCGCGCAACGGCGCGAAGAGGGAGCGTGAGAGCGACGCGGTGGCCGAGATGGTGGGCGCGATAAAGGTGTTGCGCGATGGGTTCGTGAGGATGGAGCAGATGAAGATGGAGATGGCGAGGGAAATTGAGAGCATGCGAATGGAGATGGAGATGAAGCGCACGGAGATGATCCTGGACTCTCAGCAGCGGATCGTTGAGGCTTTCGCCAGGGCCGTTTCACAAAAGAGGAGCAAGGGCAAGTCGACGCCTTCTCCCTCGTCGCAACCCTGA 954 0.6048 MASPSSPTDSNPPSALPLTLAAPPSTSSRRLPPPCWTPEETSALIDAYRDKWYSLGRTNLKATHWQEVADAVTAQCPNASPTAKTAVQCRHKMEKLRKRYRTEIQRLRSLPLPRLINNSTTASPSSWVHFKSMDSMEKGPNKPHTDTTTATNPNTPTNNLNFPDDDNDDDDLYEEFKNAPGSNTRSLNKLYKNGFGSGSASGFRIRIPAGVPNHTSSKFFNAPPPGMVPRNGAKRERESDAVAEMVGAIKVLRDGFVRMEQMKMEMAREIESMRMEMEMKRTEMILDSQQRIVEAFARAVSQKRSKGKSTPSPSSQP* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0929 317 MobiDBLite consensus disorder prediction 1 35 - -
Vra4g0929 317 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 4 312 IPR044823 -
Vra4g0929 317 SMART 118neu2 43 141 IPR006578 -
Vra4g0929 317 MobiDBLite consensus disorder prediction 1 26 - -
Vra4g0929 317 Gene3D - 36 102 - -
Vra4g0929 317 Coils Coil 263 283 - -
Vra4g0929 317 Coils Coil 90 110 - -
Vra4g0929 317 MobiDBLite consensus disorder prediction 142 162 - -
Vra4g0929 317 MobiDBLite consensus disorder prediction 132 173 - -
Vra4g0929 317 PANTHER TRANSCRIPTION FACTOR 4 312 - -
Vra4g0929 317 Pfam Myb/SANT-like DNA-binding domain 34 136 IPR044822 -
Vra4g0929 317 ProSiteProfiles Myb-like domain profile. 36 97 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0929 Vra-Chr4 16345336 16346950 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g0929 35 153 Trihelix Transcription Factor Family AT3G14180 29.412 2.13e-14 71.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Vra4g0929 Myb_DNA-bind_4 7.6e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0929 - - gmx:102665993 448.358