Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0237 ATGGGAAAGGACCTGATTTCTTCCGACCAGACCGCTATTCAAATTCAGGACAATAATCCAGGATGCATGTGGGGCATGCTTAAAATTCTTGATTACCATCGTTGGCGCGTAAAAAAGGTGTTTCCCCACAAAAGGAGAAGACATGCCACATATAAGAGAAAAACCATTTTGTATAACCAACTTGATGACCAACAAGATGGAGTTACAGAATGGGAGCCCCTCCTGGTCAGACAAGAAAGCGAAAAACTGCATGCTGCAGGCAAAAGTTCTCCCAGATACAACCAAAAGGAAACACGAACTGGAAAAGAGTTTAAGAAAGAATACTCCAAAGGCAGTGATACCATGGACTACTCGAGGAAAAACCAGGCCAGTAAGGAGTATGGACTTCATCTGGAAAAAAATGGCAAGACAACAGAAGCTTACCTTAACCATAAGCCTACGGAAATAAACAAGCATAATGGCGACATTTCCTATAAATTTGAGAAACATTCTGATGTTTTTGAGTTTCTTAGGGTGGAGAAGGATTTATTACTCAAATTTCTGCGAGACATGGACTTCAGTGGGAAAAAATTCCATCAACCTTCCCAAACCAAAGCAAGATTGACAAAATGTGGGTCATTTCCTTTAGCCTCAACTTCACAGATGAGGAACATTAGCTCTAGGTCGTTAAAACACAAGCAAAACGAAATTTATCCAAAGGGAGAAAAACTGTTTGATGTTACCCAGGAATCAAACATGTCAATGTCCAGTTTTGTGAAAGATATTTCTTATGAGAAGCCACGAACTTTGGTGAGTGATCTTGGTGTTGATAGTGCCATGAAACAAAAAGCAATTATTTCTTCAAGGTCTTCTCATGAATCAAATCACAGAGGGTGGAATCAGTTGGTTCTTCATCAATTCAAAGCTATAAAGCAGAAGATAAAACATGCTCTTGTGGAATTCAGAAAAAGTGGTAAGCAAACTTCTGCTGAAGCTATCCAACACAGAGCTTCGCCTGAATATAGCATCATCAATAATGAGGAAGAGATCTCGCAAAGTTTACAAGATGGCGTGGTTCAAGTATACAAAAGGAGCAAAAGCTCAAATGAAACTAAAGCTTCTGATTATGATTCCAACAGACATGATGCCCGGCTCATGCGGAGAACATCTTCTCTAAATGAATCATTGGATAGATATACTCAGTTGTTCGAGAAAAGCTTCAGCAAAGAAGCTAAGTGGCAAAGCTCAAAGTCTAAAAGCTTAAAATTGACACACGAGGATAGGATCCACAAGAGTGCACATGTTCCTAACTTTTCAAGAAATAAGATTTTGGAGAAAATTGATGAAGTTACCTGTGACCAAAAGGAGGACATGGATGAGGCAGCAGTGGGGGATGAAAGTTTTACACAAGAAATAGAGGAAATGAGTAATATGACTGCCTATCTTAGCAAGGAGGTGATGCCAACTCTTGAAACTGCCTGCGAGGACAATATAACCAGCCACAAAGAAGGCACAGAATTGTATACCCAAGTCTCTACATTGGAGGAATTGGAAGCTGATTTATCAGATAAAGGAAGTGTATGGCCAGACTCTTCATCCAACAGAAATGCAAGTGGAATAACAGCTGAAGATACAGATTACCCTTCCAATTTCAAATATTTAAAAAATGTTCTTGAATTTTCGGGATTCTTGGGAAATGAGCACAGTCAGATGCGATACACAATAGACCAGCCACTGAAGCCCTCCTTGTTCAAAGATTTGGAAGCAAGTTTGCTGCATGAAATAGAAGCCTCTGAAGAAGAGACAACCAACCATTATGATCACCAACTCATTTTTAACTTAGTGAACGAGGTGCTGCTCGAAATTTATGGAAGGTCACCAACTTACTTTCCAAGACCATTCTCCTTCAACCCCCGCCTCCAGCCAATGCCTAAAGGGAACTATCTTCTGAATGAAGTGTGGACTAGTGTTAATTCATACCTGACCTTGAGACCTGAGCTAGATCAGACATTAGATGATGTTGTGGGTCGAGATTTGGCAAAAGGAAGAGGGTGGATGATCCTTCAAGAGGAAGAGGAGTACGTAGCACTTGAACTAGAAGAGATGATAATGGATGATTTGTTTGATGAATTTATCTTCTCATGA 2124 0.4007 MGKDLISSDQTAIQIQDNNPGCMWGMLKILDYHRWRVKKVFPHKRRRHATYKRKTILYNQLDDQQDGVTEWEPLLVRQESEKLHAAGKSSPRYNQKETRTGKEFKKEYSKGSDTMDYSRKNQASKEYGLHLEKNGKTTEAYLNHKPTEINKHNGDISYKFEKHSDVFEFLRVEKDLLLKFLRDMDFSGKKFHQPSQTKARLTKCGSFPLASTSQMRNISSRSLKHKQNEIYPKGEKLFDVTQESNMSMSSFVKDISYEKPRTLVSDLGVDSAMKQKAIISSRSSHESNHRGWNQLVLHQFKAIKQKIKHALVEFRKSGKQTSAEAIQHRASPEYSIINNEEEISQSLQDGVVQVYKRSKSSNETKASDYDSNRHDARLMRRTSSLNESLDRYTQLFEKSFSKEAKWQSSKSKSLKLTHEDRIHKSAHVPNFSRNKILEKIDEVTCDQKEDMDEAAVGDESFTQEIEEMSNMTAYLSKEVMPTLETACEDNITSHKEGTELYTQVSTLEELEADLSDKGSVWPDSSSNRNASGITAEDTDYPSNFKYLKNVLEFSGFLGNEHSQMRYTIDQPLKPSLFKDLEASLLHEIEASEEETTNHYDHQLIFNLVNEVLLEIYGRSPTYFPRPFSFNPRLQPMPKGNYLLNEVWTSVNSYLTLRPELDQTLDDVVGRDLAKGRGWMILQEEEEYVALELEEMIMDDLFDEFIFS* 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0237 707 MobiDBLite consensus disorder prediction 515 535 - -
Vra4g0237 707 MobiDBLite consensus disorder prediction 82 119 - -
Vra4g0237 707 PANTHER PROTEIN TRM32 439 707 - -
Vra4g0237 707 PANTHER PROTEIN TRM32 1 433 - -
Vra4g0237 707 MobiDBLite consensus disorder prediction 95 119 - -
Vra4g0237 707 PANTHER PROTEIN TRM32 439 707 IPR044257 -
Vra4g0237 707 PANTHER PROTEIN TRM32 1 433 IPR044257 -
Vra4g0237 707 Pfam Domain of unknown function (DUF4378) 544 703 IPR025486 -
Vra4g0237 707 MobiDBLite consensus disorder prediction 519 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0237 Vra-Chr4 5054935 5059306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g0237 165 697 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 28.870 1.72e-43 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra4g0237 - - gmx:100788333 856.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0237 4 5054935 5059306 Vra4g0237 4 5054935 5059306 ECH