Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra4g0173 ATGGCCGAAATGGAAGAAATTGGACCTGATGTCTGTTCGGATTTAGAAGTTGATGATATTAGATGCCCCAATATAGCAGAGAAAGATGTCAGTGATGAAGAGATTGAAGCAGAAGAATTGGAGCGGCGGATGTGGAAGGATCGAATCAAACTCAAAAGGCTAAAGGAAAGACAGAAGCTGGCGATTCAGCAAGCTGCAGAGAAACAAAAGCCAAGGCAGTCCAGTGATCAAGCTCGTCGGAAGAAAATGTCAAGAGCACAGGATGGGATTCTGAAGTATATGCTGAAGCTTATGGAAGTCTGCAAAGCCCGTGGATTTGTATACGGGATCATTCCTGAGAAGGGAAAGCCAGTCAGTGGTTCATCTGATAACATTAGAGCATGGTGGAAGGAGAAGGTAAAGTTTGATAAGAATGGCCCTGCAGCTATAGCCAAGTATGAAGCTGATTGTCTTGCTATGAGTGAGGCTGATAACAGCCGAAATGGTAACTCGCAGAGCATTCTCCAAGACCTGCAAGATGCAACACTTGGATCACTTTTGTCTTCTTTGATGCAACATTGTGATCCTCCTCAGAGGAAGTATCCTTTGGAAAAGGGCGTACCTCCACCATGGTGGCCAACTGGTAATGAAGATTGGTGGTCACAGTTGAATTTACCTCATGGTCAGAGTCCTCCTTATAAGAAGCCACATGATTTGAAGAAGATGTGGAAAGTGGGAGTGCTCACTGCTGTTATAAAGCATATGTCACCTAATATTGCAAAGATAAGGAGGCATGTTCGGCAGTCAAAATGCTTGCAGGACAAGATGACAGCAAAGGAAAGTGCAATTTGGTTGGGGGTATTAAGTCGGGAAGAAGCTCTCATTAGGCAGCCTAGTAGTGACAATGGTACATCTGGAGTAACTGGAATGCTACCTGGTGTTCCTGCTGAGAATAAGCAAGCTGCTACTAGTAGTGCAAGCAACTATGATGTTGATGGTACTGATGATGGCATTGGTTCTGTTTCGTCTAAAGAGGATAGGAGAATTCAGATTGTGGAAACTGAACCACCAGTTAACTCGCGCAGGGTTAGGAAGCCTGTCCAAGATAGAGATCAATCTAAGCAGCGACCGAGAAAAATCCGCGTGACATCAAGGACTGTTGACAAACCACCAGCACAATCTGACAATGAAGTTTTACATGTCGAGCCAAGAAGTAAAGGGCTTAATATTAACCAGACAGGAGCAGAAGTAGTTCGAATCCAGATTCATGGAAATGAACAGTCCAATGAGACAGATTCTGCTGCAAGGCCACTGGAAAAGGAGCTTGAGGTGCCTGCACAACTACCAGCACCCGAGTTTGATCATTACTCTTATTTACATACAAACAACTTAATTTCCACAGAAAGTATTTATACGAGTGGAAGGCCAATACACTATCCTGAGTTGCAAAACCCTGACATGCAGCATGAACCCACATATAATCTTTATAATCCAGCAGCAGGGTATGATCCTGGTCATAAGCAGCAGCTACATCCTGGGAACAACAGTGAAGGAAGGCCAGAGATTGATGCAGTTCATGTACAAGCTGTGCATATGAAAGGGGATGAAATTACTGGAGGAGATTTGCAATATTTTGGTAAAGATGCATTTCAGAACGAGCTTGATAGACCTATTGATCACCCTTTCTTTGGATCACCGCTTAGTAGCATGTCATTAGATTTTGGAGGACTAAACAGTCCCTTCCATTTAGATGATTTCTTGGGTGATGATGAAATGATACAGTACTTTGGAGCATAA 1776 0.4347 MAEMEEIGPDVCSDLEVDDIRCPNIAEKDVSDEEIEAEELERRMWKDRIKLKRLKERQKLAIQQAAEKQKPRQSSDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGSSDNIRAWWKEKVKFDKNGPAAIAKYEADCLAMSEADNSRNGNSQSILQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGVPPPWWPTGNEDWWSQLNLPHGQSPPYKKPHDLKKMWKVGVLTAVIKHMSPNIAKIRRHVRQSKCLQDKMTAKESAIWLGVLSREEALIRQPSSDNGTSGVTGMLPGVPAENKQAATSSASNYDVDGTDDGIGSVSSKEDRRIQIVETEPPVNSRRVRKPVQDRDQSKQRPRKIRVTSRTVDKPPAQSDNEVLHVEPRSKGLNINQTGAEVVRIQIHGNEQSNETDSAARPLEKELEVPAQLPAPEFDHYSYLHTNNLISTESIYTSGRPIHYPELQNPDMQHEPTYNLYNPAAGYDPGHKQQLHPGNNSEGRPEIDAVHVQAVHMKGDEITGGDLQYFGKDAFQNELDRPIDHPFFGSPLSSMSLDFGGLNSPFHLDDFLGDDEMIQYFGA* 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra4g0173 591 Gene3D - 72 148 IPR023278 GO:0003700|GO:0005634
Vra4g0173 591 Gene3D - 157 296 IPR023278 GO:0003700|GO:0005634
Vra4g0173 591 Coils Coil 37 57 - -
Vra4g0173 591 MobiDBLite consensus disorder prediction 332 378 - -
Vra4g0173 591 SUPERFAMILY DNA-binding domain of EIN3-like 166 289 IPR023278 GO:0003700|GO:0005634
Vra4g0173 591 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 11 589 IPR006957 GO:0005634
Vra4g0173 591 MobiDBLite consensus disorder prediction 289 389 - -
Vra4g0173 591 PANTHER ETHYLENE INSENSITIVE 3-LIKE 3 PROTEIN 11 589 - -
Vra4g0173 591 Pfam Ethylene insensitive 3 38 285 IPR006957 GO:0005634
Vra4g0173 591 MobiDBLite consensus disorder prediction 61 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra4g0173 Vra-Chr4 4532981 4536145 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra4g0173 16 574 EIL Transcription Factor Family AT1G73730 53.886 0.0 543
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Vra4g0173 EIN3 3.2e-127 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra4g0173 4 4532981 4536145 Vra4g0173 4 4532981 4536145 ECH