Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra3g1050 ATGAAGAGGCACTGGCGCAACATCAGTCACGACGAAGAAAGCCTCCCAGATTCCGATTCCGACACGCGCTCCACCAGGAAATTCCCTCTCACGCGCCTCATGGCGTTCTCTCTCTTTTTTTCTCTCTTTCTCTTCTCCCTCACGTTCCTTTTCCCACACCCTCCCATCGAATCATCTCCAACTATAAAAGCTCTGCTCCAACTCAAACAAACTCAACAAGGTGACGTATCTGATTCTGTTGAGTTGCAAAAAGATAAACTACTTGGTGGCCTTTTAGCAGGTGGTTTCGATGAAAGATCTTGCTTCAGCAGGTACCATTCTGCCTCGTATGGGAAAGGACTATCAGGAAATCCTTCACCTTACCTTATTTCTAGATTGAGAAAATATGAAGCTCTTCACAAGGAATGTGGACCTTACACTGAATCCTATAATAAAACTGTGAAAGATCTCAGGTCTGGTCATGTAAGTGATTCCCCTTGTAAATATGTGGTATGGATTTCATATAGTGGGCTAGGGAATAGGATATTGACCTTAGCTTCTGCATTTCTATACGCCCTCCTCACGAATCGTGTTTTATTAGTTGATCCTGGAGCTGATATGGTAGATCTTTTTTGTGAACCGTTTCCACATGGTTCCTGGTTTCTCCCTCCTGATTTCCCTCTCAACAGTCATTTTTCCAAATTTGATCAGAAATCTGATCAATGTTACGGGAAAATGCTGAAAAATAAAGCAACTACAAAATCCACTGTGCCCTCTTTTGTCTATCTTCATTTAGCACATGACTATGATGATCAAGACAAACTTTTCTTCTGTGATGAAGACCAAACTTTTCTTCAGAAAGTACCATGGTTAGCGGTGAGAACAGATAATTACTTTGTCCCATCTCTATTCTTGATGCCATCGTTTGAGCAGCAACTGAGTGATCTCTTTCCGAACAAGGAAACAATTTTTCATTTCTTGGGTAGATATCTTTTCCACCCCACCAACAAAGTATGGGGACTTGTTAGTAGATACTATCAAGCTTATTTAGCTAATGCTGATGAAAAATTAGGCATCCAGATAAGAGTGTTTGAAACTGGAACTGGTCCATTTCAACATGTGTTGGATCAGATCTTAGCTTGCACCTTAAAGGAGAATCTTTTACCTGATGTTATTCGAAAGGGTGATTTTGTTAACTCATCAGGAAAGCCGAAGTCAAAAGCTGTACTGATGACATCGTTGAGCTCTGGTTATGTTGAGAAAGTGAGAGACATGTATTGGGAACATCCTACAGCGACAGGAGAAATTATTGGCATTTACCAGCCAAGCCATGAAGGTTATCAACAAACAGAGAAGAAGATGCACAACCAAAAAGCTTGGGCAGAAATGTACTTATTGAGCTTGACCGACGCGTTGGTCACGAGCTCGTGGTCTACTTTCGGCTATGTGGCACAGGGGCTTGGAGGTTTGAAACCATGGATACTGTACAAGCCAGAGAATGGAACAGCCCCTGATCCAGCTTGTCAACGTGCCATGTCAATGGAGCCATGCTTCCATGCTCCTCCCTTCTATGATTGTAAGGCTAAGAGAGGAACTGATACTGGTGCACTTGTTCCACATGTACGGCATTGTGAGGATATGAGCTGGGGTCTTAAGCTTGTAGACAGCTTTAGTTCGCAATAA 1662 0.4248 MKRHWRNISHDEESLPDSDSDTRSTRKFPLTRLMAFSLFFSLFLFSLTFLFPHPPIESSPTIKALLQLKQTQQGDVSDSVELQKDKLLGGLLAGGFDERSCFSRYHSASYGKGLSGNPSPYLISRLRKYEALHKECGPYTESYNKTVKDLRSGHVSDSPCKYVVWISYSGLGNRILTLASAFLYALLTNRVLLVDPGADMVDLFCEPFPHGSWFLPPDFPLNSHFSKFDQKSDQCYGKMLKNKATTKSTVPSFVYLHLAHDYDDQDKLFFCDEDQTFLQKVPWLAVRTDNYFVPSLFLMPSFEQQLSDLFPNKETIFHFLGRYLFHPTNKVWGLVSRYYQAYLANADEKLGIQIRVFETGTGPFQHVLDQILACTLKENLLPDVIRKGDFVNSSGKPKSKAVLMTSLSSGYVEKVRDMYWEHPTATGEIIGIYQPSHEGYQQTEKKMHNQKAWAEMYLLSLTDALVTSSWSTFGYVAQGLGGLKPWILYKPENGTAPDPACQRAMSMEPCFHAPPFYDCKAKRGTDTGALVPHVRHCEDMSWGLKLVDSFSSQ* 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra3g1050 553 MobiDBLite consensus disorder prediction 1 24 - -
Vra3g1050 553 Pfam Xyloglucan fucosyltransferase 65 520 IPR004938 GO:0008107|GO:0016020|GO:0042546
Vra3g1050 553 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 1 552 - -
Vra3g1050 553 Gene3D - 158 206 - -
Vra3g1050 553 PANTHER FUCOSYLTRANSFERASE 2-RELATED 1 552 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra3g1050 Vra-Chr3 10591057 10593831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra3g1050 24 547 Xyloglucan Fucosyltransferase1 AT2G03220 62.879 0.0 687
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vra3g1050 K13681 - gmx:100775878 990.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra3g1050 3 10591057 10593831 Vra3g1050 3 10591057 10593831 ECH