Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1695 ATGGAATCCCCCGTTGATGTTGTGCCAGCTGCAAAACGCCCCCGATCAATGGGATTTTCTCCTGACCCTGGTAGAGACAAAAGACTGAAAATTTCAAGTTATAGCCTGTCATACTCAGCACATGATAAGACTTCGAATGTTGTTGATTACAACAATCCATTTGCAATATCTGATGTTCTGGATAATTTAGAGAGTGGAAAATTTGGAAGTGTCACAAAGGACATAGAAGACCTTATTGCCCAAAAAATGAAAATATTGGGCCCTTACTTTGTTAAATATCCCATACTTGTGGATCAATGGGTGAAAGCAATAAAGAAACATGATGAAGAAACTCCTAAGTTGGAAAATCAACTAGTTACTGTTTCGACGGATCAAAATGTTATAGATCTTGAGGAGGAACACACCAGAAAGGATGTCCCTGCAACACAAGATCCTATTGTGATTATTGATTCAGATGATGAAGATGATGGAGATGAAAAATCTATGGTCCCATTTCATGAAGTTGTGTTGCCGACACTAGTTGCACCGTCTCCTGCATTGAAGATAACTGGGTATCTACCTGCCATTCCTTACCTGGAAGAAAGAGATCTAATAATTGAGACAAGTATGGAGGATAAACCTAACAATACTCAGAACAATAGAGGCATTTATGTTGGTGTACAGGAAGAGGAAGAAGATGAGCTTGATACTGAAGATGACGGTCTAGGAGATATTTGGAAGGAGATGTCAATGGCAATAGAATGTTCCAAAGATGTTTCTGTTGATCTCCAGCCAGATGAAGAAGCAGAAGAAGACTATGATGATGATGATTGTGATCATTCTTTTGTCTTAAAAGACGATCTTGGTTATGTTTGTCGCGTTTGTGGGGTTATTGGCCGGGGAATTGAAACCATATTTGAGTTTCAGTACAAGGTTAAACGCAGCACAAGAACTTATGCATCTGATTCATGGAATACCAAGAAAACAGATGCATTTGGAATTAATGTTGTTAAAGATGACCTCGTAGTTACTGAAATCCCAGCACACCCTAGACACATGAAACAGATGAAGCCCCATCAAGTTGAAGGATTCAATTTTCTTGTTAGAAATCTTGCAGGCGACCATCCTGGTGGCTGCATCTTAGCCCATGCTCCAGGATCTGGGAAAACATTCATGATAATCAGTTTCATGCAAAGTTTTCTAGGCAAGTATCCGAATGCAAGACCCTTAGTGGTGCTTCCTAAGGGAATATTGTCAACATGGAAAAAGGAGTTTCAAATATGGCAGGTGGAGAACATACCTCTATATGACTTCTACACAGTGAAGGCAGACACTAGAAGTCAACAACTTGAAGTGCTGAATCAATGGAGGGAGAAGAAGAGTATTCTTTTCTTAGGATACAAACAGTTCTCCACTATTGTCTGTGATAATGGAAACGATATATCATCACGTTGCCAAGATATTTTACTGAAAGTTCCTTCAATTCTAATTTTAGATGAGGGACACAATCCTAGGAATGAAAACACAGATATACTACAGTCTCTTGTAAAAGTTGAGACGCCTAGAAAAGTTGTACTGTCAGGAACCCTTTATCAAAATCATGTCAAGGAGGTGTTTAACATTCTAGATCTTGTTCGGCCGAAATTTTTGAAGATGGAAACATCAAAACCTATCGTGAGGCGCATCCAAAGTAGAGTTTATATACCAGGGATGAAAGGATTCTCTAATTTAGTTGAAAACACTTTGCAGCAGGACACTGATTTTAAAACGAAAATAGCTGTTATACAAGATTTGCGTGAGATGACAAGCAAGGTACTTCACTATTATAAAGGAGATTTTCTTGATGAGCTTCCTGGTCTAGTGGATTTTACTTTAATGCTCACTCTTAGCCCTAGCCAGAAGACTGAAGTAGCAAAAATAAAAAAACAATCTACAAGAAAGTTCAGGATATCTTCTGTAGGAAGTGCTGTCTATCTGCATCCTAAACTGAAACCGCTAGCAGAAAAAAATTGTGGTAAAACTCCTATATCCGATCATGTAATGGATGATTTGGTAGATAAACTGGATATTAGAGATGGTGTGAAGTCAAAATTTTATCACAACATGCTAAATCTGTGTGAATCAGCAGGGGAGAAGCTTCTAGTTTTCAGTCAGTATCTGTTACCCTTGAAATATTTAGAAAGGTTGACTATTAACTGGAAAGGCTGGAGTCTTGGAAGAGAAATTTTTGTAATCTCAGGAGATTCAACTCCTGAGCAGCGAGAATGGTCCATGGAAAAATTCAACAATTCTCGTGAAGCTAAAGTCTTCTTTGGCTCAATCAAGGCATGTGGAGAGGGTATCTCACTGGTTGGGGCATCCCGCATAATTATCTTGGACGTTCATCTCAATCCATCAGTTACACGTCAAGCTATAGGCCGTGCATTTAGACCCGGCCAGAAGAAGAAGGTGTTTGTGTATCGTTTAGTATCTGCTGATTCTCCAGAAGAAGAAGATCACCATGCTTGTTTCAAGAAAGAACTAATTTCAAAAATGTGGTTTGAATGGAATGAGTATTGCGGTGATCGAGCTTTTGAAGTTGAGGCAGTTGAGGTGAAAGATTGTGGTGATGAATTTCTTGAAAGTCCTCTGTTAGGGGAGAACGTAAAAGCTTTATATAGAAGGTGA 2646 0.3896 MESPVDVVPAAKRPRSMGFSPDPGRDKRLKISSYSLSYSAHDKTSNVVDYNNPFAISDVLDNLESGKFGSVTKDIEDLIAQKMKILGPYFVKYPILVDQWVKAIKKHDEETPKLENQLVTVSTDQNVIDLEEEHTRKDVPATQDPIVIIDSDDEDDGDEKSMVPFHEVVLPTLVAPSPALKITGYLPAIPYLEERDLIIETSMEDKPNNTQNNRGIYVGVQEEEEDELDTEDDGLGDIWKEMSMAIECSKDVSVDLQPDEEAEEDYDDDDCDHSFVLKDDLGYVCRVCGVIGRGIETIFEFQYKVKRSTRTYASDSWNTKKTDAFGINVVKDDLVVTEIPAHPRHMKQMKPHQVEGFNFLVRNLAGDHPGGCILAHAPGSGKTFMIISFMQSFLGKYPNARPLVVLPKGILSTWKKEFQIWQVENIPLYDFYTVKADTRSQQLEVLNQWREKKSILFLGYKQFSTIVCDNGNDISSRCQDILLKVPSILILDEGHNPRNENTDILQSLVKVETPRKVVLSGTLYQNHVKEVFNILDLVRPKFLKMETSKPIVRRIQSRVYIPGMKGFSNLVENTLQQDTDFKTKIAVIQDLREMTSKVLHYYKGDFLDELPGLVDFTLMLTLSPSQKTEVAKIKKQSTRKFRISSVGSAVYLHPKLKPLAEKNCGKTPISDHVMDDLVDKLDIRDGVKSKFYHNMLNLCESAGEKLLVFSQYLLPLKYLERLTINWKGWSLGREIFVISGDSTPEQREWSMEKFNNSREAKVFFGSIKACGEGISLVGASRIIILDVHLNPSVTRQAIGRAFRPGQKKKVFVYRLVSADSPEEEDHHACFKKELISKMWFEWNEYCGDRAFEVEAVEVKDCGDEFLESPLLGENVKALYRR* 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1695 881 SMART helicmild6 720 805 IPR001650 -
Vra2g1695 881 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 487 843 IPR027417 -
Vra2g1695 881 Gene3D - 317 561 IPR038718 -
Vra2g1695 881 Pfam Helicase conserved C-terminal domain 697 804 IPR001650 -
Vra2g1695 881 MobiDBLite consensus disorder prediction 1 24 - -
Vra2g1695 881 SMART ultradead3 345 554 IPR014001 -
Vra2g1695 881 Pfam SNF2-related domain 369 631 IPR000330 GO:0005524|GO:0140658
Vra2g1695 881 Gene3D - 611 860 IPR027417 -
Vra2g1695 881 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 36 881 IPR044567 GO:0080188
Vra2g1695 881 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 690 857 IPR001650 -
Vra2g1695 881 PANTHER PROTEIN CHROMATIN REMODELING 35 36 881 - -
Vra2g1695 881 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 363 541 IPR014001 -
Vra2g1695 881 CDD SF2_C_SNF 694 816 - -
Vra2g1695 881 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 328 543 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1695 Vra-Chr2 25236591 25244036 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Vra2g1695 SNF2_N 1.2e-18 CL0023