Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1694 ATGGCGGAGCAAGGCAGCGCCGCCGTCAACGACGGCGAAACAGAACCGCAACAAAACAAACACCGCGTCCTCAACAACCACAGCGACAACAACGACGTAGACAACAACGACGAGAGTTTAGATCCAGAGTTGTTCTGCTGTTTGCTTCAGCCAGTCACCGCCGACAGAGATCCCGAGTACATTGGCATTCGCCGCCTCCTCCTTCTTCGGAAGGCGGAGGCCGGAATTATTCACCGCAGAGATTGGAGATGCAATGGAAAAACTTATGTGGCATACCGGAATTACCTAAGTAGGCCTAGAAACTGGGAAAGGGATAGTTCGCGAGCCCCTAGTCTGCACAGTACTCCAGGAAACAGTGGCCGATTTTTTCCATCTCCAAGTCCACACTCCCGTTGGTCTGAGGTGGACAGCTTGAGTTCTGGGAGGGATCTGCAAAATGCAAATCCAGTACATAATCATAGATCAAGTTTTGGGTCAAGTGTAAGTGATTCTGATCGTCCTAGACACCGTAGGGCTGAGTCCGCTTATTCTTTTGTTGGAATGCATTGTATCTTTGACAAGTGCAAAGCCTCTGTTTCGGTGTTGAAGTTTGGGCACAAGAGTTCTGATTTACTTGCTTATGGGGCAGCTGATGGAACCTTGACTGTCTGCAATGTATCAGAGAATCCCTCAGTCATAAAACAATTAGAAGGGCATTCCAACGATGTAACAGATTTTGATTTTACATCAAATAATCAATACATTGCTTCGTCTTCATGGGATAAAACTGTGAGAGTATGGGAGATAGCGAAAGGTATTTGCATACGGGTGATATATGGAGTATGTCCACAATTGTGTATTCGTTTTCACCCTGTAAATAATAACCTCCTTTCAGTTGGAAATGCAAACAAAGAAATCAATGTGTTCAATTTTAGTACTGGAAGGGTAATTAATAAATCACTATTTGACAGTGGAGTTACCTCTTTGGACCATGACCATACAGGACTTCTCTTATTTTGTGGAGATGCACAGGGATGTATATACTCAGTAAATATGAACTCTCACACAGGTGTATTATCTCGCTCCCATCGTTATAGAAGTAGTAGCAAGCCCAAATCTCCTGTTACCACAGTGCAGTATAGGAGTTTCTCTCTACTTGCACGCGGACCTGTGTTGTTGACATGTACCCAGGATGGAAACCTGTCTTTCTTCAGTGTGGCTTCGGAGATAAATGGCTATTTAACTCTTCGATGCTCGCTAAAATTAGCTCCACGTGTACACAAATTTCGAGCTTCTTTCTGTCCTCTCCTATCCCTTGAAAAAGGAGAATTCATAGTTACTGGAAGTGAGGACTCAAATGTCTACTTTTATGATTTAACTCGGCCCAAAAATACATGTGTGAACAAGCTACAGGGTCATGGGTTTCCTGTGCTGGGTATTGCCTGGAACCATGGAGAAAATTTATTGGCTTCATCTGATTTTTATGGCGTAGTAATTGTGTGGAAGAGAGAAAGAACAAATCAAAACAAACATACACAACAACGGTAG 1527 0.4361 MAEQGSAAVNDGETEPQQNKHRVLNNHSDNNDVDNNDESLDPELFCCLLQPVTADRDPEYIGIRRLLLLRKAEAGIIHRRDWRCNGKTYVAYRNYLSRPRNWERDSSRAPSLHSTPGNSGRFFPSPSPHSRWSEVDSLSSGRDLQNANPVHNHRSSFGSSVSDSDRPRHRRAESAYSFVGMHCIFDKCKASVSVLKFGHKSSDLLAYGAADGTLTVCNVSENPSVIKQLEGHSNDVTDFDFTSNNQYIASSSWDKTVRVWEIAKGICIRVIYGVCPQLCIRFHPVNNNLLSVGNANKEINVFNFSTGRVINKSLFDSGVTSLDHDHTGLLLFCGDAQGCIYSVNMNSHTGVLSRSHRYRSSSKPKSPVTTVQYRSFSLLARGPVLLTCTQDGNLSFFSVASEINGYLTLRCSLKLAPRVHKFRASFCPLLSLEKGEFIVTGSEDSNVYFYDLTRPKNTCVNKLQGHGFPVLGIAWNHGENLLASSDFYGVVIVWKRERTNQNKHTQQR* 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1694 508 ProSiteProfiles Trp-Asp (WD) repeats profile. 229 270 IPR001680 GO:0005515
Vra2g1694 508 ProSitePatterns Trp-Asp (WD) repeats signature. 248 262 IPR019775 -
Vra2g1694 508 SUPERFAMILY WD40 repeat-like 190 499 IPR036322 GO:0005515
Vra2g1694 508 Gene3D - 430 508 IPR015943 GO:0005515
Vra2g1694 508 Gene3D - 177 276 IPR015943 GO:0005515
Vra2g1694 508 PANTHER WD REPEAT-CONTAINING PROTEIN 13 24 499 - -
Vra2g1694 508 MobiDBLite consensus disorder prediction 108 162 - -
Vra2g1694 508 MobiDBLite consensus disorder prediction 15 34 - -
Vra2g1694 508 MobiDBLite consensus disorder prediction 1 36 - -
Vra2g1694 508 Pfam WD domain, G-beta repeat 226 260 IPR001680 GO:0005515
Vra2g1694 508 Pfam WD domain, G-beta repeat 458 495 IPR001680 GO:0005515
Vra2g1694 508 SMART WD40_4 264 303 IPR001680 GO:0005515
Vra2g1694 508 SMART WD40_4 222 261 IPR001680 GO:0005515
Vra2g1694 508 SMART WD40_4 306 344 IPR001680 GO:0005515
Vra2g1694 508 SMART WD40_4 415 451 IPR001680 GO:0005515
Vra2g1694 508 SMART WD40_4 178 218 IPR001680 GO:0005515
Vra2g1694 508 SMART WD40_4 456 495 IPR001680 GO:0005515
Vra2g1694 508 SMART WD40_4 364 398 IPR001680 GO:0005515
Vra2g1694 508 PANTHER WD REPEAT PROTEIN 26-RELATED 24 499 - -
Vra2g1694 508 Gene3D - 277 416 IPR015943 GO:0005515
Vra2g1694 508 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 229 262 - -
Vra2g1694 508 MobiDBLite consensus disorder prediction 102 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1694 Vra-Chr2 25228297 25235616 Transposed