Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1693 ATGAAGTCCTCTGTTGACTACGTGTTGTCAGCTAAGCGCCGTCGTTCAATCGGATCTTCCTCTAGCCCTGACAGAGGCAAAAGACAGAAGTTATCAGATGTAGCTGACCATTCGAATGCATCTGCAATTTCGGATGTTGTGGTTCATACAGAGCATGGAAAATATGGAAGTGTCACAAAGGAAATAGAGGACCTTATAGCCATAAAAATGCAGATACTTGGACCTTACTTTGCCAAGTATCCCGTACTTGTTAATGAATTCATGAATGTGGTAACTGACCACGATAAAGACACTGGTTTGACATATCATAATGTCATAGATTTGACGGGGGAAAACATTGAGAAGAAAGTTCATGCAGCTACAGTTATTCACATTGATTCAGATGTGGAAGATGATGGAGATAAAAAGGCTATTGTTCCTTTTCATGAAGCTTTAAAAGTGGAAGATGATATACACAATAAATCTATTGTTCCATTTCATGAAGCTTCAGAAGAAGAAGAAGATTACAGACAAAATAAATCAATTGCTCAGTTTGAAGAAATTGTGTTGCCGCTAGTTGCACCGTCTCCTGTTGTGACGAAAACAGTTAGGCAGCGTACTCCCATTCCTAACCGTCGCAAAAGTAAAGATCCGAAAATTGAGACAAGTACCGCGGGTAAAGGTGTTTATATCGGTGTAAATAAGGAAGATGATCATCAGGTCAACCCCGCAGACAATGAGGGCCTAGAAGATCTTTGGAAGGAGATGTCGATGGCAATGGAGTGTTCCAAAGTTGTTTCCGCGAATCCTCTGCCAGATGAAGAAGCAGAAAGTGACGAGGAGTGCGATCATTCTTTTATTTTAAAAGATGATATTGGTTATGTTTGTCGGGTTTGTGGAATTATTGAGAGAGGAATTGAAACCATATTTGAGTTTCAGTACAAGGTTAAACGGAGCACAAGAACTTATGCATATGACTCTCGTGACACCAAAGCAAAAACAGATGTATTTGCAAATAATGTTGCTGAAGATGATCTCATAGTAACTCAATTCTCAGCACATCCTAGGCACATGAAACAGATGAAACCTCATCAAATTGACGGATTCAATTTTCTTGTTAGAAATCTTGGGGGTGATCATCCCGGTGGCTGCATCTTAGCCCATGCTCCAGGATCAGGGAAAACATTCATGATAATAAGTTTCATGCAAAGTTTTCTAGGCAAGTATCCGAATGCAAGACCATTGGTGGTGCTTCCGAAGGGAATATTGTCAACATGGAAAAAGGAATTTCAGACATGGCAAGTGGAAGACATACCTCTATATGACTTTTATACGGTGAAGGCAGATAGTAGAAGCCAACAACTGGAAGTATTGAAGCTATGGGAGAAGAAGAAAAGTATTCTTTTCTTAGGATATAAACAGTTCTCCTCTATTGTCTGTGATAAGGGGACCAACCATATATCGTCATCATGCCAAGAGATTTTACTGAGGAATCCTTCAATACTTATTTTAGACGAGGGGCATAATCCTAGGAATGAAAACACAGATATGGTCCAATCCCTTGCAAAAGTTCACACACCTAGAAAAGTTGTTCTGTCGGGAACGCTTTATCAAAATCATGTGAGGGAGGTGTTTAACATTCTAGATCTTGTTCGTCCAAAGTTTTTGAAGATGGAAACATCAAAAGCTATCTGCAGGCGCATTTATAGTAGAGTTCATATACCAGGTGTGAGAACATTCTTTGATATTGTTGAAAACACTTTGAAGGGCATAGACTTTAAAGCGAAAGTAGCCGTCATACAAGATTTACGTGAGATGACAAAGAGCGTCCTTCATTATTATAAAGGAGATTTTCTTGATGAGCTTCCTGGTCTCGTTGATTTTACAGTGGTTCTCAATCTTAGCCATAAACAAAAGCTTGACATTGAACAATTAAAAAAGTCATCTGGAAAGTTCAAGATATCTTCTGTAGGAAGCGCAGTCTATTTGCACCCTAACCTGAAATCTTTAGCTGAAAAATGTGGAGAAAATAATATATCTGATGATATAATTGATGCTCTGATAGAAAAATCAGATGCCAGAGATGGTGTGAAGTCCAAATTCTTTTGGAACATGCTAAATTTGTGTGAATCAGCCGGAGAGAAACTCCTAGTATTCAGTCAATACTTGCTTCCTTTGAAATATTTAGAAAGGTTAATCATTCAAAGTAAAGGGTGGAGTCTAGGAAAGGAAATATTTGTAATCTCAGGAGAATCTAGCTATGAGCAGCGAGAATGGTCCATGGAAAGATTTAACAATTCTCCTAGTGCTAAAGTCTTCTTTGGCTCCATCAAGGCTTGTGGAGAGGGCATATCATTGGTAGGGGCATCACGCATAGTTATATTGGACGTTCATCTTAATCCTTCAGTTACTCGTCAAGCTATTGGTCGTGCATTCAGACCTGGCCAGCAGAAGAAAGTTTTTGTGTATCGATTGGTGTCTGCTGATTCTCCAGAAGAGGAGGATAACAGCATTTGTTTCAAGAAGGAATTGATTTCAAAAATGTGGTTTGAATGGAACGAGTATTGTGGTGATCGAGCATTTGAAGTTGAGGAAGTTCTTCTGAAAGAGTGTGGCGATCTTTTTCTTGAGAGTCCATTACTTGGAGAAGATGTAAAAGCTCTTTACAAAAGATGGATAAGCAATTATTTTTCACTTTCCTGTGTGATTGTGAGTAAAATTTTCTGA 2706 0.3888 MKSSVDYVLSAKRRRSIGSSSSPDRGKRQKLSDVADHSNASAISDVVVHTEHGKYGSVTKEIEDLIAIKMQILGPYFAKYPVLVNEFMNVVTDHDKDTGLTYHNVIDLTGENIEKKVHAATVIHIDSDVEDDGDKKAIVPFHEALKVEDDIHNKSIVPFHEASEEEEDYRQNKSIAQFEEIVLPLVAPSPVVTKTVRQRTPIPNRRKSKDPKIETSTAGKGVYIGVNKEDDHQVNPADNEGLEDLWKEMSMAMECSKVVSANPLPDEEAESDEECDHSFILKDDIGYVCRVCGIIERGIETIFEFQYKVKRSTRTYAYDSRDTKAKTDVFANNVAEDDLIVTQFSAHPRHMKQMKPHQIDGFNFLVRNLGGDHPGGCILAHAPGSGKTFMIISFMQSFLGKYPNARPLVVLPKGILSTWKKEFQTWQVEDIPLYDFYTVKADSRSQQLEVLKLWEKKKSILFLGYKQFSSIVCDKGTNHISSSCQEILLRNPSILILDEGHNPRNENTDMVQSLAKVHTPRKVVLSGTLYQNHVREVFNILDLVRPKFLKMETSKAICRRIYSRVHIPGVRTFFDIVENTLKGIDFKAKVAVIQDLREMTKSVLHYYKGDFLDELPGLVDFTVVLNLSHKQKLDIEQLKKSSGKFKISSVGSAVYLHPNLKSLAEKCGENNISDDIIDALIEKSDARDGVKSKFFWNMLNLCESAGEKLLVFSQYLLPLKYLERLIIQSKGWSLGKEIFVISGESSYEQREWSMERFNNSPSAKVFFGSIKACGEGISLVGASRIVILDVHLNPSVTRQAIGRAFRPGQQKKVFVYRLVSADSPEEEDNSICFKKELISKMWFEWNEYCGDRAFEVEEVLLKECGDLFLESPLLGEDVKALYKRWISNYFSLSCVIVSKIF* 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1693 901 PANTHER PROTEIN CHROMATIN REMODELING 35 22 884 - -
Vra2g1693 901 SMART ultradead3 350 557 IPR014001 -
Vra2g1693 901 PANTHER SNF2 DOMAIN-CONTAINING PROTEIN CLASSY 2-RELATED 22 884 IPR044567 GO:0080188
Vra2g1693 901 SMART helicmild6 720 808 IPR001650 -
Vra2g1693 901 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 489 846 IPR027417 -
Vra2g1693 901 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 368 547 IPR014001 -
Vra2g1693 901 Pfam SNF2-related domain 374 632 IPR000330 GO:0005524|GO:0140658
Vra2g1693 901 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 693 860 IPR001650 -
Vra2g1693 901 MobiDBLite consensus disorder prediction 18 34 - -
Vra2g1693 901 MobiDBLite consensus disorder prediction 1 36 - -
Vra2g1693 901 MobiDBLite consensus disorder prediction 196 215 - -
Vra2g1693 901 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 333 569 IPR027417 -
Vra2g1693 901 CDD SF2_C_SNF 697 819 - -
Vra2g1693 901 Pfam Helicase conserved C-terminal domain 702 807 IPR001650 -
Vra2g1693 901 Gene3D - 318 564 IPR038718 -
Vra2g1693 901 Gene3D - 617 870 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1693 Vra-Chr2 25221388 25227022 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Vra2g1693 SNF2_N 8.8e-19 CL0023