Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1691 ATGAGTGATGTTCAAGAAAATGATACACTGAATACTCTTTATGAGGTTTCATTGAGAGGTAGTGTTTCTGAGTTAGAAACTCTGATTAGAAGAGACCCTCTTATCCTTCACAGAATTTCCTTAACAACATTCACTGAAACTCCTTTGCACATATCAGCTTTACTTGGTCACCTTGATTTCACAAAGTCCCTTCTGACTCACAAACCTCAACTTGCTCTTGAGACTGACCACTGCAAACGCACCCCTCTTCATCTGGCTTCTGCTGAAGGCCATGTAGAGATTGTTCATGTTTTGCTGCAGACATGTGAAGATGCATGCTTGATGACTGACCAAGATGGAAGGATTCCTCTTCATTATGCAGCTATGAGAGGAAGGACAGAGGTTGCAAGACAGTTGATTAGTGGAGCAAAGTCAGAATCTGTGATGGTGTTTGATGGATCAGGAAAAACTATGTTTCACCTTTGTGTCGAGCACAATCATTTGGAGACTTTGAAAACACTGGTGGAAGTTGGAAATGTCAGGGAGGATTTTCTAAACTGTGGAGACTTTCATCATGGAAATACCATTCTCCATTTGGCTGTTATGTTCAAGCAACTTGAGAGTGTAAGGTACTTGCTCTCAATATCCAAAATAAAAGAAGAAGCAAATATTGAGAACAAGATGGGTTACACTGCTTTGGACATGCTAGAGCATGTTCCAAAAGACATGAGAAGTCTTCAAATAAAACTCATGCTGATGGACGCCGGATTCAAGAAGAATGAAAATAACCAAGTTCATCATCCACCATCTGCATCAATCATAGATGTTCCTCCATCAAGGACACCGAATCCAAATGAAAAGTTTTGGATTAACTCTTTGAAGCGTGTGAACAAGGTCTTACAACATAAGAGTGGTAGGTTGGAAGAAATGAGAGGCATGTTGAGTTTGGTGTCTACAATGATCTCAACCGTCACCTTTGGTGTTGTGATCAATCCACCAGGTGGTAATATATCTATCGAGTCACTTCTATATGTACAATATAGAGAAATGTTGACTAGTTTCTTAACGATGAACACAATCTCTTTCATTGCATCACTTGGTGTCACTCTCTTACTTATAAGTGGAGTTCCCTTAAAGAATGAAATCACAATGGGACTGTTATCAGTAGGCACATGTGTCTGTCTCACATTTCTTGTGCTTACTTACATACATGCTGTGCCTTTGAACAAAAATATGTATTTTGGGGACACATTTTCTGTGTTGTTTTCTTGGCTTGGACTTGTTGGGACAATAGTTGTGTTTACCATAATTCGTGTAATTTCTAAGCTAGTGAAAGTTCTGTAG 1323 0.393 MSDVQENDTLNTLYEVSLRGSVSELETLIRRDPLILHRISLTTFTETPLHISALLGHLDFTKSLLTHKPQLALETDHCKRTPLHLASAEGHVEIVHVLLQTCEDACLMTDQDGRIPLHYAAMRGRTEVARQLISGAKSESVMVFDGSGKTMFHLCVEHNHLETLKTLVEVGNVREDFLNCGDFHHGNTILHLAVMFKQLESVRYLLSISKIKEEANIENKMGYTALDMLEHVPKDMRSLQIKLMLMDAGFKKNENNQVHHPPSASIIDVPPSRTPNPNEKFWINSLKRVNKVLQHKSGRLEEMRGMLSLVSTMISTVTFGVVINPPGGNISIESLLYVQYREMLTSFLTMNTISFIASLGVTLLLISGVPLKNEITMGLLSVGTCVCLTFLVLTYIHAVPLNKNMYFGDTFSVLFSWLGLVGTIVVFTIIRVISKLVKVL* 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1691 440 Gene3D - 2 261 IPR036770 -
Vra2g1691 440 Pfam Domain of unknown function 299 398 IPR026961 -
Vra2g1691 440 SMART ANK_2a 78 107 IPR002110 GO:0005515
Vra2g1691 440 SMART ANK_2a 112 143 IPR002110 GO:0005515
Vra2g1691 440 SMART ANK_2a 44 73 IPR002110 GO:0005515
Vra2g1691 440 SMART ANK_2a 185 214 IPR002110 GO:0005515
Vra2g1691 440 SMART ANK_2a 147 176 IPR002110 GO:0005515
Vra2g1691 440 ProSiteProfiles Ankyrin repeat profile. 112 134 IPR002110 GO:0005515
Vra2g1691 440 ProSiteProfiles Ankyrin repeat profile. 185 207 IPR002110 GO:0005515
Vra2g1691 440 PANTHER HOMEOBOX PROTEIN WARIAI 18 433 - -
Vra2g1691 440 SUPERFAMILY Ankyrin repeat 13 229 IPR036770 -
Vra2g1691 440 ProSiteProfiles Ankyrin repeat region circular profile. 185 207 - -
Vra2g1691 440 ProSiteProfiles Ankyrin repeat profile. 78 110 IPR002110 GO:0005515
Vra2g1691 440 Pfam Ankyrin repeats (3 copies) 112 171 IPR002110 GO:0005515
Vra2g1691 440 Pfam Ankyrin repeats (3 copies) 40 100 IPR002110 GO:0005515
Vra2g1691 440 PANTHER ANKYRIN REPEAT-CONTAINING PROTEIN ITN1-LIKE 18 433 - -
Vra2g1691 440 ProSiteProfiles Ankyrin repeat region circular profile. 112 134 - -
Vra2g1691 440 ProSiteProfiles Ankyrin repeat region circular profile. 78 100 - -
Vra2g1691 440 Pfam Ankyrin repeat 185 206 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1691 Vra-Chr2 25200950 25203091 Dispersed