Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1663 ATGGTTCGCTCTCATGGCGTCACTCTCGTTAATCGCCTTTCTCTCCGATCTTTCCGTGGTGCCAACAATTCTGTACGCATCTTTTCGACTTCTTTTTCAGGGTGCTTCAATGAAATATGGTTTTCCAATTGTGCTGCAAATTCTCATTTGCAGGTTTATCAATCAGTGTTCCAAAGGGGTTATAGGACACTGAACTCTGGGCTTTTCCATCCATCGAGAGTTACTGGTAGTTTTACGTCTAATGTTGGAGGTGGCTTTAATTTGAAGAAATGGTTACTATTGGGGGCTGCAAATAAATATTGGGAGGCATCTAGATTAATTCATGGCTCAGCATTTTTAGCAAGAGACTATTATGATATTCTCGGTGTGAGTAAGAACGCAAGTTCTTCCGAAATAAAGAAAGCTTACTATGGGCTTGCAAAAAGGCTCCATCCAGATACAAACAAAGATGATCCTGAAGCTGAAAAGAAGTTTCAAGAAGTCTCGATAGCTTATGAGGTTTTGAAGGACGAGGAAAGGCGACAACAATATGATCAGCTTGGTCATGATGCTTATGTAAACCAACAAAGCACTGGTTTCGGTGGTGAGGGTGGCTTCAATCCCTTCGAGCAGATATTCCGTGATCATGATTTTGTCAAGAGCTTCTTCCATCAGAATATTGGTGGAGAGGATGTGAAGACTTTTATTGAGCTATCTTTTATGGAAGCTGTACAAGGGTGCACCAAAACTGTAACATTTGAAACAGACATGCTTTGTAATGCTTGTGGTGGGAGTGGTGTTCCTCCTGGTACAAGACCTGAAACTTGTAAGCGATGTAAAGGGTCAGGAGTGTTATTTGTACAAGTTGGCATATTCAGAATGGAGAGTACCTGCGGTACCTGCAAGGGAACTGGAAAAATTGTATCGAATTTCTGCAAGTCTTGCAGGGGTGAGAAGGTTGTCAAAGGAACAAAGTCGGTCAAGTTGGATATTATGCCTGGGATAGACACCAATGAGACCATAAAGGTTTTCGGAGGTGGTGGAGCAGATCCTGATAGAGGTCATCTTGGTGATCTCTATGTTACTATCAAGGTTAGAGAAGACCCTGTTTTTCGCAGAGAAGGATCTAATATTCACGTAGATGCTGTGTTAAGTATCACTCAGGCGATTTTGGGGGGAACTATTCAAGTCCCGACTCTTACTGGAGAAGTTGTACTTAAGGTTCGTCCAGGGACCCAACCTGGTCAGAAAGTGGTTTTGAAAAAGAAAGGGATCAAGACAAAAAATTCTTACACATTTGGGGATCAATATGTTCATTTTAATGTCAACATCCCAACAAACCTGACACAGAGACAACGAGAGTTGATTGAAGAGTTTGCCAAGGAAGAGCAAGAGGAGTTCGATAAACGGAGAAGTGCTTCAGCTTCTGGTTGA 1413 0.4211 MVRSHGVTLVNRLSLRSFRGANNSVRIFSTSFSGCFNEIWFSNCAANSHLQVYQSVFQRGYRTLNSGLFHPSRVTGSFTSNVGGGFNLKKWLLLGAANKYWEASRLIHGSAFLARDYYDILGVSKNASSSEIKKAYYGLAKRLHPDTNKDDPEAEKKFQEVSIAYEVLKDEERRQQYDQLGHDAYVNQQSTGFGGEGGFNPFEQIFRDHDFVKSFFHQNIGGEDVKTFIELSFMEAVQGCTKTVTFETDMLCNACGGSGVPPGTRPETCKRCKGSGVLFVQVGIFRMESTCGTCKGTGKIVSNFCKSCRGEKVVKGTKSVKLDIMPGIDTNETIKVFGGGGADPDRGHLGDLYVTIKVREDPVFRREGSNIHVDAVLSITQAILGGTIQVPTLTGEVVLKVRPGTQPGQKVVLKKKGIKTKNSYTFGDQYVHFNVNIPTNLTQRQRELIEEFAKEEQEEFDKRRSASASG* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1663 470 PRINTS DnaJ domain signature 118 136 IPR001623 -
Vra2g1663 470 PRINTS DnaJ domain signature 136 151 IPR001623 -
Vra2g1663 470 PRINTS DnaJ domain signature 153 173 IPR001623 -
Vra2g1663 470 PRINTS DnaJ domain signature 173 192 IPR001623 -
Vra2g1663 470 Gene3D - 359 467 - -
Vra2g1663 470 CDD DnaJ_zf 252 312 IPR001305 GO:0031072|GO:0051082
Vra2g1663 470 Hamap Chaperone protein DnaJ [dnaJ]. 113 466 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Vra2g1663 470 ProSitePatterns Nt-dnaJ domain signature. 158 177 IPR018253 -
Vra2g1663 470 SUPERFAMILY HSP40/DnaJ peptide-binding domain 222 361 IPR008971 GO:0006457|GO:0051082
Vra2g1663 470 Gene3D DnaJ domain 113 224 IPR036869 -
Vra2g1663 470 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 57 470 - -
Vra2g1663 470 Pfam DnaJ central domain 252 312 IPR001305 GO:0031072|GO:0051082
Vra2g1663 470 SMART dnaj_3 115 173 IPR001623 -
Vra2g1663 470 ProSiteProfiles Zinc finger CR-type profile. 239 317 IPR001305 GO:0031072|GO:0051082
Vra2g1663 470 Gene3D - 225 354 - -
Vra2g1663 470 Gene3D - 252 312 - -
Vra2g1663 470 PANTHER DNAJ-CLASS MOLECULAR CHAPERONE 57 470 - -
Vra2g1663 470 SUPERFAMILY Chaperone J-domain 115 217 IPR036869 -
Vra2g1663 470 CDD DnaJ 116 170 IPR001623 -
Vra2g1663 470 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 239 315 IPR036410 -
Vra2g1663 470 Pfam DnaJ C terminal domain 228 438 IPR002939 -
Vra2g1663 470 SUPERFAMILY HSP40/DnaJ peptide-binding domain 363 449 IPR008971 GO:0006457|GO:0051082
Vra2g1663 470 ProSiteProfiles dnaJ domain profile. 116 181 IPR001623 -
Vra2g1663 470 Pfam DnaJ domain 116 178 IPR001623 -
Vra2g1663 470 CDD DnaJ_C 223 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1663 Vra-Chr2 24757815 24778782 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vra2g1663 2 24757815 24778782 Vra2g1663 2 24757815 24778782 ECH