Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vra2g1369 ATGGCGTCACAAAGATTAACTCTGATCATATTTCTCTTATCCCTTTTCAAGCTTTCTTCTTCAAGCCTTAATAATGCTGCTGGCATTACTGTGTACTGGGGGCAAAACTCTGAAGAAAGCGATTTGTTAAGCACATGTGAGACTGGTAACTACAAGATTGTGATCCTCGCTTTCCTCAACCAGTTCGGTGGAGGGAAAACACCAGCTTGGGACTTCGGCGGTCACTGTGACAAAGGTTCCGGGAAAAAGTGCACCGAACTAGAGTCCCAAATAAAGTACTGCCAGAAGAAACGCATTAAAGTGTTCCTTTCAATCGGAGGAAACCTTGGCAATTCAGACTACTCCCTGAACTCGCCGGAGGAGGCAAAGGAGGTGGCCAAATACATTTTCAACAACTTCCTTAGCGGCAAATACGGTCCACTGGGAAGCGTCAAGCTTGATGGCATTGACTTCTTCATCCAAAAAACGGAAGATTACTGGGACAACCTTGTCAAGGAACTCGACTCCTTACGACCAACCATTAGCCATCCCTTTTCCTTGTCCGCAGCGCCTAGCTGCCTCACATACCCAATCCCCTTTCTTGGGAAAGCCATTGCCACCAAACTCTTCGACTATGTCTTCGTTAGGTTCTACGACAAGTCTAGTTGTTCCTACGTCAGTGGCACCAACGCCCTCTTGGACTCCTGGGACAAGTGGGTTGACTTGGTCGCCTCCCCTAACTTGCTCTTCGTGGGCTTGCCAGCATCCCCAGACGCCGGTGAGGGTTACATTCCGCCGGAGATCCTCATTGGCGAGGTGCTTCCGTACGCGAAACTAGCCTCCAACTACGGGGGAGTGATGCTGTGGGATAGATACCGCGATGCTAAGACTCGTTACAGTGATAAAATATTGTTCGATGTGACTAAATCCAACGTGCCGGTGTCTGAGGCCCTTTCCGACAAAATTTACCTGTGCGTGTCCAAGGCGTTGAACCGCGGCTTAGATTACTAG 990 0.4919 MASQRLTLIIFLLSLFKLSSSSLNNAAGITVYWGQNSEESDLLSTCETGNYKIVILAFLNQFGGGKTPAWDFGGHCDKGSGKKCTELESQIKYCQKKRIKVFLSIGGNLGNSDYSLNSPEEAKEVAKYIFNNFLSGKYGPLGSVKLDGIDFFIQKTEDYWDNLVKELDSLRPTISHPFSLSAAPSCLTYPIPFLGKAIATKLFDYVFVRFYDKSSCSYVSGTNALLDSWDKWVDLVASPNLLFVGLPASPDAGEGYIPPEILIGEVLPYAKLASNYGGVMLWDRYRDAKTRYSDKILFDVTKSNVPVSEALSDKIYLCVSKALNRGLDY* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vra2g1369 329 Pfam Glycosyl hydrolases family 18 29 286 IPR001223 GO:0005975
Vra2g1369 329 Gene3D Glycosidases 25 314 - -
Vra2g1369 329 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 27 318 IPR001223 GO:0005975
Vra2g1369 329 CDD GH18_hevamine_XipI_class_III 27 296 IPR045321 -
Vra2g1369 329 PANTHER ENDOCHITINASE 1 296 - -
Vra2g1369 329 SUPERFAMILY (Trans)glycosidases 25 296 IPR017853 -
Vra2g1369 329 PANTHER III ACIDIC ENDOCHITINASE, PUTATIVE-RELATED 1 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vra2g1369 Vra-Chr2 21900052 21901316 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vra2g1369 5 300 Glycoside Hydrolase AT5G24090 45.033 7.36e-80 243